RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 CDK2P24941 298 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 CD34P28906 385 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 EPHA2P29317 976 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 C21orf33P30042 268 aaPredicted RBP7.37□□□□□ -1.23
CIITA-208ENST00000572665 SLC6A1P30531 599 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 OR3A1P47881 315 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 NPBWR2P48146 333 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 SNU13P55769 128 aaKnown RBP7.37□□□□□ -1.23
CIITA-208ENST00000572665 TP53I3Q53FA7 332 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 KRBOX4Q5JUW0 171 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 TCF23Q7RTU1 214 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 OR5D14Q8NGL3 314 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 OR2G2Q8NGZ5 317 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 OR9G1Q8NH87 305 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 EME1Q96AY2 570 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 FGGYQ96C11 551 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 MBOAT4Q96T53 435 aa7.37□□□□□ -1.23
CIITA-208ENST00000572665 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.37□□□□□ -1.23
CIITA-208ENST00000572665 ODAMA1E959 279 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 E9PQ18 207 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 BUB1B-PAK6H3BSN5 160 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 DEGS1O15121 323 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
CIITA-208ENST00000572665 HCKP08631 526 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 KCNJ3P48549 501 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ISL1P61371 349 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ZNF85Q03923 595 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 SCN1BQ07699 218 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 AESQ08117 197 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 HLA-DRB5Q30154 266 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ABCA11PQ4W5N1 156 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 SLC25A30Q5SVS4 291 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 LDLRAD2Q5SZI1 272 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 TPTE2P1Q5T6R2 138 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 PRAMEF5Q5TYX0 476 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ZFP1Q6P2D0 407 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 SERPINA12Q8IW75 414 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 C10orf67Q8IYJ2 551 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 RDH10Q8IZV5 341 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ACBD7Q8N6N7 88 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 PYDC1Q8WXC3 89 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 RPEQ96AT9 228 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 ADAT3Q96EY9 351 aaPredicted RBP7.36□□□□□ -1.23
CIITA-208ENST00000572665 Q96MT0 163 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
CIITA-208ENST00000572665 QTRT1Q9BXR0 403 aaKnown RBP7.36□□□□□ -1.23
CIITA-208ENST00000572665 BARHL1Q9BZE3 327 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 MOB4Q9Y3A3 225 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 HSPE1-MOB4S4R3N1 261 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 KIAA2026Q5HYC2 2103 aa7.36□□□□□ -1.23
CIITA-208ENST00000572665 A0A087X0M5 115 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 IGKV1-9A0A0C4DH69 117 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 A0A1B0GX30 115 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 PSMB11A5LHX3 300 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 TMEM212A6NML5 194 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 J3QLW9 94 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 MPZL2O60487 215 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 IGLV1-47P01700 117 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 CCDC159P0C7I6 412 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 ZNF19P17023 458 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 KIR3DL2P43630 455 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 GLIPR1P48060 266 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 RAB7AP51149 207 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 SLC35B1P78383 322 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 RBM39Q14498 530 aaKnown RBP7.35□□□□□ -1.23
CIITA-208ENST00000572665 C9orf152Q5JTZ5 239 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 HIST2H2BDQ6DRA6 164 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 SLC16A12Q6ZSM3 486 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 OSR2Q8N2R0 312 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 COMMD1Q8N668 190 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 OR13C9Q8NGT0 318 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 CHPT1Q8WUD6 406 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 DDB2Q92466 427 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 MYDGFQ969H8 173 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 TOMM40LQ969M1 308 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 GPER1Q99527 375 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 NCOR1P1Q9H4R4 102 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 INPP5EQ9NRR6 644 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 IL36RNQ9UBH0 155 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 DHDHQ9UQ10 334 aa7.35□□□□□ -1.23
CIITA-208ENST00000572665 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 DPPA5A6NC42 116 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 TEX22C9J3V5 150 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 SLC33A1O00400 549 aaPredicted RBP7.34□□□□□ -1.23
CIITA-208ENST00000572665 SULT1B1O43704 296 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 MMP23AO75900 390 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 FADS2O95864 444 aaKnown RBP7.34□□□□□ -1.23
CIITA-208ENST00000572665 IGLL1P15814 213 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 NFYBP25208 207 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 OR3A4PP47883 348 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 SNRPGP62308 76 aaKnown RBP7.34□□□□□ -1.23
CIITA-208ENST00000572665 MADCAM1Q13477 382 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 HES1Q14469 280 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 KISS1Q15726 138 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 PAN3Q58A45 887 aaKnown RBP7.34□□□□□ -1.23
CIITA-208ENST00000572665 VAX1Q5SQQ9 334 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 UNQ9370/PRO34162Q6UXP9 181 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 FOXRED2Q8IWF2 684 aa7.34□□□□□ -1.23
CIITA-208ENST00000572665 OR8H3Q8N146 312 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms