RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 Q6ZTK2 550 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 CAPSLQ8WWF8 208 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 NEDD4LQ96PU5 975 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 GFI1Q99684 422 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 LIN7BQ9HAP6 207 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 PLGRKTQ9HBL7 147 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 GFOD1Q9NXC2 390 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 TRRAPQ9Y4A5 3859 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 TMEM14DPA8MWL7 114 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 SLC17A2O00624 439 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 VSIG10L2P0DP72 767 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 CHATP28329 748 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 EMX1Q04741 257 aaPredicted RBP16.13■□□□□ 0.17
NUP88-204ENST00000572290 UNC119Q13432 240 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 SSX1Q16384 188 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 TRAT1Q6PIZ9 186 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 SVOPQ8N4V2 548 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 CYYR1Q96J86 154 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 TM2D1Q9BX74 207 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 KCNK15Q9H427 330 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 SERTAD4Q9NUC0 356 aa16.13■□□□□ 0.17
NUP88-204ENST00000572290 IGHV3-43A0A0B4J1X8 118 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 OR2F2O95006 317 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 IGHV3-43DP0DP04 118 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 RCC1P18754 421 aaPredicted RBP16.12■□□□□ 0.17
NUP88-204ENST00000572290 RAB7AP51149 207 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 LOXL3P58215 753 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 QRFPP83859 136 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 DIAPH2-AS1Q14236 149 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 P2RY14Q15391 338 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 TMEM30BQ3MIR4 351 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 ARSJQ5FYB0 599 aaPredicted RBP16.12■□□□□ 0.17
NUP88-204ENST00000572290 PRR18Q8N4B5 295 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 LINC00311Q8N616 119 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
NUP88-204ENST00000572290 SLC25A33Q9BSK2 321 aa16.12■□□□□ 0.17
NUP88-204ENST00000572290 HBZP02008 142 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 FAM106CPP0CH98 169 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 ARSBP15848 533 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 RAB11BQ15907 218 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 Q3ZCU0 254 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 FBLN7Q53RD9 439 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 FAM53AQ6NSI3 398 aaPredicted RBP16.11■□□□□ 0.17
NUP88-204ENST00000572290 Q6ZS46 218 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 OR2W3Q7Z3T1 314 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 THNSL2Q86YJ6 484 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 OR8H3Q8N146 312 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 C8orf31Q8N9H6 132 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 OR56B4Q8NH76 319 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 OR1L1Q8NH94 360 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 MRPL30Q8TCC3 161 aaKnown RBP16.11■□□□□ 0.17
NUP88-204ENST00000572290 SULT4A1Q9BR01 284 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 OCSTAMPQ9BR26 566 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 NICN1Q9BSH3 213 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 YTHDF1Q9BYJ9 559 aaKnown RBP16.11■□□□□ 0.17
NUP88-204ENST00000572290 TAF9BQ9HBM6 251 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 MBNL3Q9NUK0 354 aaKnown RBP16.11■□□□□ 0.17
NUP88-204ENST00000572290 KCNIP1Q9NZI2 227 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 GNG12Q9UBI6 72 aa16.11■□□□□ 0.17
NUP88-204ENST00000572290 A0A1W2PPI3 338 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 FAM90A9PA6NNJ1 464 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 PEX14O75381 377 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 RANBP1P43487 201 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 PSMD7P51665 324 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 C6orf201Q7Z4U5 140 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 ZNF554Q86TJ5 538 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 SPARTQ8N0X7 666 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 DRAM1Q8N682 238 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 C11orf44Q8N8P7 122 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 CFHR4Q92496 578 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 URM1Q9BTM9 101 aaKnown RBP16.1■□□□□ 0.17
NUP88-204ENST00000572290 FAAP24Q9BTP7 215 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 LPAR5Q9H1C0 372 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 NDUFB11Q9NX14 153 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 V9GY05 133 aa16.1■□□□□ 0.17
NUP88-204ENST00000572290 CCRL2O00421 344 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 HSD17B6O14756 317 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 GAPDHP04406 335 aaKnown RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 SNRNP70P08621 437 aaKnown RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 IL3RAP26951 378 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 BLVRBP30043 206 aaPredicted RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 VDAC2P45880 294 aaPredicted RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 ZNF816Q0VGE8 651 aaPredicted RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 C2orf68Q2NKX9 166 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 UBE2UQ5VVX9 321 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 CD200R1LQ6Q8B3 271 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 OR51D1Q8NGF3 324 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 OR10V1Q8NGI7 309 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 MMP27Q9H306 513 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
NUP88-204ENST00000572290 LRRC42Q9Y546 428 aa16.09■□□□□ 0.17
NUP88-204ENST00000572290 A0A0A6YYD4 124 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 TRDV1A0A1B0GX56 115 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 PDCD5O14737 125 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 CLDN12P56749 244 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 HES1Q14469 280 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 ABCA11PQ4W5N1 156 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 ZNF439Q8NDP4 499 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 WNT10AQ9GZT5 417 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 OR2S2Q9NQN1 319 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms