RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 FAM90A9PA6NNJ1 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A12PA8MX19 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A5PA8MXJ8 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 MCRIP1C9JLW8 97 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 SDCBPO00560 298 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 HSD17B6O14756 317 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 MAS1P04201 325 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 AMY1AP04745 511 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 AMY2AP04746 511 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A15PP0C7V4 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A13PP0C7W8 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A14PP0C7W9 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A24PP0C7X0 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 TMEM11P17152 192 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 MAPK3P27361 379 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 CD83Q01151 205 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 ZNF497Q6ZNH5 498 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 CDH26Q8IXH8 852 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 NKAIN3Q8N8D7 197 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FBLIM1Q8WUP2 373 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 CCDC107Q8WV48 283 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 RAB9BQ9NP90 201 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 PLCXD1Q9NUJ7 323 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 RCC2Q9P258 522 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 TSSC4Q9Y5U2 329 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 NOTCH3Q9UM47 2321 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 A0A1W2PPE3 182 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 A6NHS1 94 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 C15orf65H3BRN8 121 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 CCRL2O00421 344 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 SPINT2O43291 252 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 ORC5O43913 435 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGKV1D-33P01593 117 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGKV1-33P01594 117 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 PF4P02776 101 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 CD1AP06126 327 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 IL3RAP26951 378 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 DIAPH2-AS1Q14236 149 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 RAB12Q6IQ22 244 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 LAIR2Q6ISS4 152 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 MOB3BQ86TA1 216 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR52M1Q8NGK5 317 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 UBALD1Q8TB05 177 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 MYDGFQ969H8 173 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 ETAA1Q9NY74 926 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 TRAPPC2LQ9UL33 140 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 KIAA2026Q5HYC2 2103 aa9.83□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGHV3-43A0A0B4J1X8 118 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 FGF16O43320 207 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 CRTAPO75718 401 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 MT-ND4P03905 459 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 GAPDHP04406 335 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGHV3-43DP0DP04 118 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 MGMTP16455 207 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 REG1BP48304 166 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 ZNF816Q0VGE8 651 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 GPR50Q13585 617 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 HNF4GQ14541 408 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 TMEM30BQ3MIR4 351 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 TCTEX1D4Q5JR98 221 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 C6orf183Q5T699 404 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 NANOGP1Q8N7R0 232 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 C5orf56Q8N8D9 126 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 UQCC2Q9BRT2 126 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 MND1Q9BWT6 205 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 SELENOIQ9C0D9 397 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 BANF2Q9H503 90 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 FKBP14Q9NWM8 211 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 GNG12Q9UBI6 72 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 PEX16Q9Y5Y5 336 aa9.82□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGHV1-3A0A0C4DH29 117 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 PSMB11A5LHX3 300 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM90A10PA6NDY2 464 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM90A7PA6NKC0 464 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM90A23PA8MXZ1 464 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 ANKRD65E5RJM6 399 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 PIN1P1O15428 100 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 CA11O75493 328 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 Q3ZCU0 254 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 SYT6Q5T7P8 510 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 PRR18Q8N4B5 295 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 TMEM104Q8NE00 496 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR4K15Q8NH41 348 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 SGCDQ92629 289 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 TFAP2CQ92754 450 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM46BQ96A09 425 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 RHOVQ96L33 236 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 Q96M66 194 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 CST11Q9H112 138 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 DCLRE1BQ9H816 532 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms