RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PARP16Q8N5Y8 322 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 PXT1Q8NFP0 134 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 OR1N2Q8NGR9 330 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 OR5AK2Q8NH90 309 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 NCOR1P1Q9H4R4 102 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 PALMDQ9NP74 551 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-220ENST00000569827 LCE6AA0A183 80 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 I3L521 148 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 SAP30O75446 220 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 LYL1P12980 280 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 CD1BP29016 333 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 VHLP40337 213 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF616Q08AN1 781 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 MMDQ15546 238 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 XAF1Q6GPH4 301 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 KCTD20Q7Z5Y7 419 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 LINC00311Q8N616 119 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF491Q8N8L2 437 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF439Q8NDP4 499 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 OR10A7Q8NGE5 316 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 OR4K15Q8NH41 348 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 OR1L1Q8NH94 360 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 JAM3Q9BX67 310 aa9.36□□□□□ -0.91
CAPN3-220ENST00000569827 EXOGQ9Y2C4 368 aaKnown RBP9.36□□□□□ -0.91
CAPN3-220ENST00000569827 MAGEA13PA6NCF6 341 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 C12orf77C9JDV5 145 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 AIPO00170 330 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 RPSAP08865 295 aaKnown RBP9.35□□□□□ -0.91
CAPN3-220ENST00000569827 IL3RAP26951 378 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 KCNJ3P48549 501 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 PAX5Q02548 391 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 GALEQ14376 348 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 GNMTQ14749 295 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 CT45A1Q5HYN5 189 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 DDI2Q5TDH0 399 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 C1orf146Q5VVC0 180 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF529Q6P280 563 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 SLC16A12Q6ZSM3 486 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 OR13C5Q8NGS8 318 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 OR52N1Q8NH53 320 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 CT45A3Q8NHU0 189 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 DLX4Q92988 240 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-220ENST00000569827 GNG12Q9UBI6 72 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
CAPN3-220ENST00000569827 SIRT4Q9Y6E7 314 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-220ENST00000569827 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 A0A087WW49 117 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 TMEM212A6NML5 194 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 EI24O14681 340 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 OVOL1O14753 267 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 MAGEB3O15480 346 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 MT-ND4P03905 459 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 CSTBP04080 98 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 IGF1P05019 195 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 OR8U8P0C7N1 319 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 GP9P14770 177 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 BLVRBP30043 206 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 PPIFP30405 207 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ADARB1P78563 741 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 NDPQ00604 133 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 LSAMPQ13449 338 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 SLC22A6Q4U2R8 563 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 FAM27D1Q5T7N8 215 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 SYT6Q5T7P8 510 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 TMEM65Q6PI78 240 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF497Q6ZNH5 498 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 SLC25A48Q6ZT89 311 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 OR52M1Q8NGK5 317 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 PYDC1Q8WXC3 89 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 CENPNQ96H22 339 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 MRPL20Q9BYC9 149 aaKnown RBP9.34□□□□□ -0.91
CAPN3-220ENST00000569827 ERVK13-1Q9NX77 482 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 A3GALT2U3KPV4 340 aa9.34□□□□□ -0.91
CAPN3-220ENST00000569827 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 HBZP02008 142 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 ALPLP05186 524 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 RCC1P18754 421 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-220ENST00000569827 GZMHP20718 246 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF93P35789 620 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-220ENST00000569827 ACTBP60709 375 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 SNRPGP62308 76 aaKnown RBP9.33□□□□□ -0.92
CAPN3-220ENST00000569827 SYS1Q8N2H4 156 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 OR52I1Q8NGK6 324 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 UBE2E2Q96LR5 201 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 METTL9Q9H1A3 318 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 OR51J1Q9H342 316 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 TRAPPC2LQ9UL33 140 aa9.33□□□□□ -0.92
CAPN3-220ENST00000569827 IGHV7-81A0A0B4J1V7 117 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 TRAV41A0A0B4J266 112 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms