RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 UPRTQ96BW1 309 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 FAHD2AQ96GK7 314 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 HDHD3Q9BSH5 251 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-212ENST00000569575 IFT46Q9NQC8 304 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 IDI2-AS1Q9NZ38 188 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 SESN1Q9Y6P5 492 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 V9GYH0 126 aa19.26■□□□□ 0.67
RAB40C-212ENST00000569575 OTOGQ6ZRI0 2925 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 MMP9P14780 707 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 CCL3L1P16619 93 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 RCVRNP35243 200 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 KRTAP1-1Q07627 177 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 GDPD1Q8N9F7 314 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 ST6GALNAC5Q9BVH7 336 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 TMPRSS13Q9BYE2 586 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 MTFP1Q9UDX5 166 aa19.25■□□□□ 0.67
RAB40C-212ENST00000569575 ELF5Q9UKW6 265 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-212ENST00000569575 A8MV72 311 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-212ENST00000569575 FABP7O15540 132 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 RGS11O94810 467 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 HBZP02008 142 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 CD34P28906 385 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 Q8N7P7 452 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 C8orf31Q8N9H6 132 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 DTX3Q8N9I9 347 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 BEST4Q8NFU0 473 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 OR13D1Q8NGV5 346 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 DEDD2Q8WXF8 326 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 TNFRSF14Q92956 283 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 ANXA10Q9UJ72 324 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 JPT1Q9UK76 154 aa19.24■□□□□ 0.67
RAB40C-212ENST00000569575 TBPP20226 339 aa19.23■□□□□ 0.67
RAB40C-212ENST00000569575 ZBTB25P24278 435 aa19.23■□□□□ 0.67
RAB40C-212ENST00000569575 SSTR5P35346 364 aa19.23■□□□□ 0.67
RAB40C-212ENST00000569575 TAS2R46P59540 309 aa19.23■□□□□ 0.67
RAB40C-212ENST00000569575 KIRREL1Q96J84 757 aa19.23■□□□□ 0.67
RAB40C-212ENST00000569575 MEIOCA2RUB1 952 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 HNF1AP20823 631 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 ACTBL2Q562R1 376 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 CABLES2Q9BTV7 478 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 TOLLIPQ9H0E2 274 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 TMEM133Q9H2Q1 129 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 GHITMQ9H3K2 345 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 RBMX2Q9Y388 322 aaKnown RBP19.22■□□□□ 0.67
RAB40C-212ENST00000569575 CSPG4Q6UVK1 2322 aa19.22■□□□□ 0.67
RAB40C-212ENST00000569575 SDCBPO00560 298 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-212ENST00000569575 ITGB1BP1O14713 200 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 YPEL1O60688 119 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 GSTT2BP0CG30 244 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 PYDC2Q56P42 97 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 Q6ZPA2 131 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 VMO1Q7Z5L0 202 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 OR11H6Q8NGC7 330 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 OR5AP2Q8NGF4 316 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 OR52I2Q8NH67 350 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 NANPQ8TBE9 248 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 CREB3L1Q96BA8 519 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 YPEL2Q96QA6 119 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 TBX15Q96SF7 602 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 WDR12Q9GZL7 423 aaKnown RBP19.21■□□□□ 0.67
RAB40C-212ENST00000569575 OR2S2Q9NQN1 319 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 GFOD1Q9NXC2 390 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 ZNF230Q9UIE0 474 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-212ENST00000569575 ACANP16112 2415 aa19.21■□□□□ 0.67
RAB40C-212ENST00000569575 TRAV39A0A0B4J263 110 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 LY6G6DO95868 133 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 PTHLHP12272 177 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 UBE2E1P51965 193 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 PRRX1P54821 245 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 LOXL3P58215 753 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 ARPC4P59998 168 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 CHRFAM7AQ494W8 412 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 CLEC9AQ6UXN8 241 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 Q8N402 240 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 RFESDQ8TAC1 157 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 PCGF1Q9BSM1 259 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 AKIP1Q9NQ31 210 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 YAE1D1Q9NRH1 226 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 NECAP2Q9NVZ3 263 aa19.2■□□□□ 0.66
RAB40C-212ENST00000569575 TRBV6-7A0A0A0MS04 114 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 CSF1P09603 554 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 SCTP09683 121 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 CD40LGP29965 261 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 AP3S2P59780 193 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 SCGB2A2Q13296 93 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 ZNF79Q15937 498 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 OR9G1Q8NH87 305 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 OR1L1Q8NH94 360 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 OR10J5Q8NHC4 309 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 ZNF596Q8TC21 504 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 EDARADDQ8WWZ3 215 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 THAP7Q9BT49 309 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-212ENST00000569575 CLEC7AQ9BXN2 247 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 SRRQ9GZT4 340 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 GNG12Q9UBI6 72 aa19.19■□□□□ 0.66
RAB40C-212ENST00000569575 HSPA12AO43301 675 aa19.18■□□□□ 0.66
RAB40C-212ENST00000569575 GSTT2P0CG29 244 aa19.18■□□□□ 0.66
RAB40C-212ENST00000569575 OR3A3P47888 321 aa19.18■□□□□ 0.66
RAB40C-212ENST00000569575 TAS2R19P59542 299 aa19.18■□□□□ 0.66
RAB40C-212ENST00000569575 PRAMEF5Q5TYX0 476 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms