RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 CCL24O00175 119 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 SULT1C2O00338 296 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 CFDP00746 253 aaPredicted RBP8.86□□□□□ -0.99
CDH3-208ENST00000569036 MT-ND4P03905 459 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 MGMTP16455 207 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 COX7A1P24310 79 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 CCR6P51684 374 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 CAPZA1P52907 286 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 OR10A3P58181 314 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 ERVFRD-1P60508 538 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 TMUB2Q71RG4 321 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 NKAIN4Q8IVV8 208 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 C11orf42Q8N5U0 333 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 LGALS14Q8TCE9 139 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 FOXRED1Q96CU9 486 aaPredicted RBP8.86□□□□□ -0.99
CDH3-208ENST00000569036 SEH1LQ96EE3 360 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 PRSS27Q9BQR3 290 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 ALG12Q9BV10 488 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 SIGLEC7Q9Y286 467 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 NOP16Q9Y3C1 178 aaKnown RBP8.86□□□□□ -0.99
CDH3-208ENST00000569036 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
CDH3-208ENST00000569036 RAB19A4D1S5 217 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ACOD1A6NK06 481 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 J3QLW9 94 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 SCO1O75880 301 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 GRPP07492 148 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ZNF19P17023 458 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 CXCL2P19875 107 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 HOXA1P49639 335 aaPredicted RBP8.85□□□□□ -0.99
CDH3-208ENST00000569036 DYNLT3P51808 116 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 B2MP61769 119 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 SSX2Q16385 188 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ZNF260Q3ZCT1 412 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 CLVS2Q5SYC1 327 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 LDLRAD2Q5SZI1 272 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 STUMQ69YW2 141 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 LINC00518Q8N0U6 118 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 OR1F12Q8NHA8 337 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 TMEM255BQ8WV15 326 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 LRRC29Q8WV35 223 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ZNF426Q9BUY5 554 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 ELL3Q9HB65 397 aaPredicted RBP8.85□□□□□ -0.99
CDH3-208ENST00000569036 SLC25A10Q9UBX3 287 aaPredicted RBP8.85□□□□□ -0.99
CDH3-208ENST00000569036 KCNG2Q9UJ96 466 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 SLC7A7Q9UM01 511 aa8.85□□□□□ -0.99
CDH3-208ENST00000569036 VPS13DQ5THJ4 4388 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 A0A0A6YYH2 397 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 A6NJ64 397 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 RFPL4AA6NLU0 287 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 RFPL4AL1F8VTS6 287 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 CDC42EP2O14613 210 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 ARPC1BO15143 372 aaKnown RBP8.84□□□□□ -0.99
CDH3-208ENST00000569036 ARPC3O15145 178 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 GMDSO60547 372 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 PTP4A3O75365 173 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 RHBDL1O75783 438 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 OR2F2O95006 317 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 LYPD3O95274 346 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 TFF1P04155 84 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 NDUFB7P17568 137 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 PRKACAP17612 351 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 PYCR1P32322 319 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 AQP2P41181 271 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 ACTBP60709 375 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 BTN1A1Q13410 526 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 OR2F1Q13607 317 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 CRMP1Q14194 572 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 INSL4Q14641 139 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 ABCA11PQ4W5N1 156 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 TMEM69Q5SWH9 247 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 ATPAF1Q5TC12 328 aaPredicted RBP8.84□□□□□ -0.99
CDH3-208ENST00000569036 ZNF695Q8IW36 515 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 BPIFA2Q96DR5 249 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
CDH3-208ENST00000569036 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 ZFP57Q9NU63 452 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 V9GY05 133 aa8.84□□□□□ -0.99
CDH3-208ENST00000569036 NPIPB13A6NJU9 1138 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SH2D7A6NKC9 451 aaPredicted RBP8.83□□□□□ -1
CDH3-208ENST00000569036 NPIPB4C9JG80 1138 aa8.83□□□□□ -1
CDH3-208ENST00000569036 H3BUI4 141 aa8.83□□□□□ -1
CDH3-208ENST00000569036 IMPA2O14732 288 aa8.83□□□□□ -1
CDH3-208ENST00000569036 XRCC3O43542 346 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SELENOFO60613 162 aa8.83□□□□□ -1
CDH3-208ENST00000569036 NDUFB2O95178 105 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SLC25A4P12235 298 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SRMP19623 302 aa8.83□□□□□ -1
CDH3-208ENST00000569036 FXYD6P3P58550 94 aa8.83□□□□□ -1
CDH3-208ENST00000569036 RPS11P62280 158 aaKnown RBP eCLIP8.83□□□□□ -1
CDH3-208ENST00000569036 DEFB136Q30KP8 78 aa8.83□□□□□ -1
CDH3-208ENST00000569036 GLB1L2Q8IW92 636 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SLC35F2Q8IXU6 374 aa8.83□□□□□ -1
CDH3-208ENST00000569036 FAM185AQ8N0U4 392 aa8.83□□□□□ -1
CDH3-208ENST00000569036 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
CDH3-208ENST00000569036 PXT1Q8NFP0 134 aa8.83□□□□□ -1
CDH3-208ENST00000569036 OR2AK2Q8NG84 335 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms