RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PFDN5Q99471 154 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 TOLLIPQ9H0E2 274 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 OBP2BQ9NPH6 170 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM9BQ9NQ34 198 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 SLC39A9Q9NUM3 307 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 GAR1Q9NY12 217 aaKnown RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 IGSF23A1L1A6 192 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 OOEPA6NGQ2 149 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 FAM90A9PA6NNJ1 464 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 IFNL4K9M1U5 179 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 TM4SF5O14894 197 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CYB5BO43169 146 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 MPDU1O75352 247 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CELA2AP08217 269 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 BCL2P10415 239 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 COX5AP20674 150 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 IL2RGP31785 369 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 KIR2DS2P43631 304 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CDX1P47902 265 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 FOXL2P58012 376 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 OR1C1Q15619 314 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ZNF674Q2M3X9 581 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 LRRC75BQ2VPJ9 315 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 IGSF11Q5DX21 431 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 KCNIP4Q6PIL6 250 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 HEPN1Q6WQI6 88 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 P4HA3Q7Z4N8 544 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CALHM1Q8IU99 346 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 C1orf210Q8IVY1 113 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 TUSC5Q8IXB3 177 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 FAM24BQ8N5W8 94 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 OR11L1Q8NGX0 322 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 NANPQ8TBE9 248 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 MRPL30Q8TCC3 161 aaKnown RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ABHD3Q8WU67 409 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 HPSE2Q8WWQ2 592 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 GMPPAQ96IJ6 420 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 AGMATQ9BSE5 352 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ADAT1Q9BUB4 502 aaKnown RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 BCL2L14Q9BZR8 327 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CHODLQ9H9P2 273 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 SEBOXQ9HB31 216 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 WFDC1Q9HC57 220 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 DLL3Q9NYJ7 618 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 NAT8Q9UHE5 227 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ERRFI1Q9UJM3 462 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-250ENST00000568290 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 ALPK2Q86TB3 2170 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 CHD7Q9P2D1 2997 aa6.52□□□□□ -1.37
ATXN3-250ENST00000568290 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 A0A1W2PPH5 198 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 FAM221AA4D161 298 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 C5orf63A6NC05 138 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 PROB1E7EW31 1015 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 EIF3GO75821 320 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 TNFSF15O95150 251 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 NXPH2O95156 264 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 VENTXO95231 258 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 MT-CO2P00403 227 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 IGHV2-5P01817 119 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 FABP1P07148 127 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 SP1P08047 785 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ADH4P08319 380 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 SCTP09683 121 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 KLK2P20151 261 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 HOXA5P20719 270 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 OMGP23515 440 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 CLDN18P56856 261 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 DLK1P80370 383 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 HGFACQ04756 655 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 SRYQ05066 204 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ZNF146Q15072 292 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 TMEM30BQ3MIR4 351 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ZNF324BQ6AW86 544 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 SLC35E4Q6ICL7 350 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 DBX2Q6ZNG2 339 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 TGIF2LYQ8IUE0 185 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 LURAP1LQ8IV03 231 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 ZNF645Q8N7E2 425 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 CPEB3Q8NE35 698 aaKnown RBP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-250ENST00000568290 OR10P1Q8NGE3 313 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 OR1K1Q8NGR3 316 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 OR51H1Q8NH63 302 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 CLDND2Q8NHS1 167 aa6.51□□□□□ -1.37
ATXN3-250ENST00000568290 GPR146Q96CH1 333 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms