RNA–Protein interactions for RNA: ENST00000568191.1

VPS35-207, Transcript of VPS35, retromer complex component, humanhuman

TSL 4

Gene VPS35, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-207ENST00000568191 OR12D2P58182 307 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 RAB8AP61006 207 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 CCL7P80098 99 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 MRPS25P82663 173 aaKnown RBP0.85□□□□□ -2.27
VPS35-207ENST00000568191 IL5RAQ01344 420 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 INCA1Q0VD86 236 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 MYO9BQ13459 2157 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TMED2Q15363 201 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 GUK1Q16774 197 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TBC1D28Q2M2D7 210 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 CEACAM21Q3KPI0 293 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 ACSM3Q53FZ2 586 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 AKIRIN2Q53H80 203 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SPIN4Q56A73 249 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 HHATQ5VTY9 493 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SYPL2Q5VXT5 272 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SPOPLQ6IQ16 392 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 FAM45BPQ6NSW5 357 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 DNM1P34Q6PK57 102 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 CD200R1LQ6Q8B3 271 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SSH2Q76I76 1423 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TRAPPC5Q8IUR0 188 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 BLIDQ8IZY5 108 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 GAPTQ8N292 157 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SPICQ8N5J4 248 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 OR2M7Q8NG81 312 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 OR1M1Q8NGA1 313 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 OR5B17Q8NGF7 314 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 OR5L1Q8NGL2 311 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 FAM45AQ8TCE6 357 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 ZFAND1Q8TCF1 268 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 NELFBQ8WX92 580 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 RAD51AP1Q96B01 352 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TLCD1Q96CP7 247 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 DGCR14Q96DF8 476 aaKnown RBP0.85□□□□□ -2.27
VPS35-207ENST00000568191 MRAP2Q96G30 205 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 KCTD7Q96MP8 289 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TMEM56Q96MV1 263 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 PRAP1Q96NZ9 151 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 APOL4Q9BPW4 351 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 DHRS9Q9BPW9 319 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 C20orf144Q9BQM9 153 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TMEM208Q9BTX3 173 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 MRPS26Q9BYN8 205 aaKnown RBP0.85□□□□□ -2.27
VPS35-207ENST00000568191 METTL9Q9H1A3 318 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 ARV1Q9H2C2 271 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 OR51B5Q9H339 312 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 MFSD1Q9H3U5 465 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 PRORYQ9H606 182 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 ABCB9Q9NP78 766 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 HEBP1Q9NRV9 189 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 TMEM38BQ9NVV0 291 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 STOML2Q9UJZ1 356 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 SLC22A7Q9Y694 548 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 MYH10P35580 1976 aa0.85□□□□□ -2.27
VPS35-207ENST00000568191 KMT2EQ8IZD2 1858 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 NAV1Q8NEY1 1877 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 MYH2Q9UKX2 1941 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 RIMS2Q9UQ26 1411 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 TRAV8-4A0A0B4J246 113 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 A0A1W2PRG6 482 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 CCRL2O00421 344 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 AZIN1O14977 448 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 PSPHP1O15172 72 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 UBDO15205 165 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 PFDN6O15212 129 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 FABP7O15540 132 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 PSCAO43653 123 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 SSNA1O43805 119 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 UGT2B11O75310 529 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 ENTPD6O75354 484 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 KCNK2O95069 426 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 SERPINA1P01009 418 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 PTHP01270 115 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 P01737 135 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 TNNC2P02585 160 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 TYMSP04818 313 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 IFNA16P05015 189 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 ISG15P05161 165 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 IGKV5-2P06315 115 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 SLC35G6P0C7Q6 338 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 UGT2B7P16662 529 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 CSRP1P21291 193 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 F8A1P23610 371 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 RPS12P25398 132 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 MSNP26038 577 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 GRPRP30550 384 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 IFNGR2P38484 337 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 OMPP47874 163 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 IDH3GP51553 393 aaPredicted RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 MTPNP58546 118 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 RANP62826 216 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 GRB2P62993 217 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 SLC35A1P78382 337 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 AESQ08117 197 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 SRSF6Q13247 344 aaKnown RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 ALX1Q15699 326 aa0.84□□□□□ -2.27
VPS35-207ENST00000568191 TOMM34Q15785 309 aaPredicted RBP0.84□□□□□ -2.27
VPS35-207ENST00000568191 C4orf26Q17RF5 130 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms