RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CCDC190Q86UF4 302 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 OR4M2Q8NGB6 313 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 SETD6Q8TBK2 473 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 MAFIPQ8WZ33 124 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 C16orf92Q96LL3 132 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 NUDT16L1Q9BRJ7 211 aaKnown RBP6.37□□□□□ -1.39
SMG1-214ENST00000568038 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 AUNIPQ9H7T9 357 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 TRAPPC2LQ9UL33 140 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 BAHCC1Q9P281 2608 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 MED13LQ71F56 2210 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 PPIAL4CA0A0B4J2A2 164 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 hADV38S2A0JD32 116 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ODAMA1E959 279 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 MEIS3P1A6NDR6 274 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 B4DSR2 109 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 SSX5O60225 188 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 CA11O75493 328 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 TOX4O94842 621 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ECDO95905 644 aaPredicted RBP6.36□□□□□ -1.39
SMG1-214ENST00000568038 MELTFP08582 738 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 PPIAL4GP0DN37 164 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 IGHV4-31P0DP07 118 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 PRSS3P35030 304 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ZNF273Q14593 569 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 TMEM249Q2WGJ8 235 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 PYDC2Q56P42 97 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 SPANXN2Q5MJ10 180 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 BAIAP2L2Q6UXY1 529 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 OR13A1Q8NGR1 328 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 UBALD1Q8TB05 177 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 MRPL30Q8TCC3 161 aaKnown RBP6.36□□□□□ -1.39
SMG1-214ENST00000568038 MRGPRDQ8TDS7 321 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ABHD1Q96SE0 405 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ST6GALNAC5Q9BVH7 336 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 C12orf4Q9NQ89 552 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMG1-214ENST00000568038 MMP26Q9NRE1 261 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ZNF230Q9UIE0 474 aaPredicted RBP6.36□□□□□ -1.39
SMG1-214ENST00000568038 RPUSD1Q9UJJ7 312 aaKnown RBP6.36□□□□□ -1.39
SMG1-214ENST00000568038 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 POLQO75417 2590 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 ABCA12Q86UK0 2595 aa6.36□□□□□ -1.39
SMG1-214ENST00000568038 KIAA2026Q5HYC2 2103 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 CRYBG3Q68DQ2 2970 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 TRGV10A0A0A0MS01 117 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 IGHV2-70DA0A0C4DH43 119 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 A8MXK9 166 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 ENSAO43768 121 aaKnown RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 NAPSAO96009 420 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 TGFAP01135 160 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 LIPFP07098 398 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 MSMBP08118 114 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 FCGR3AP08637 254 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 CCL3L1P16619 93 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 RCC1P18754 421 aaPredicted RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 ARF6P62330 175 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 PITPNAQ00169 270 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 PAX5Q02548 391 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 MEF2CQ06413 473 aaPredicted RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 LTC4SQ16873 150 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 PYHIN1Q6K0P9 492 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 Q6ZPA2 131 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 TCF23Q7RTU1 214 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 C5orf24Q7Z6I8 188 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 GAPTQ8N292 157 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 PRR18Q8N4B5 295 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 GVQW1Q8N7I0 195 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 ZNF565Q8N9K5 539 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 LY6G5BQ8NDX9 201 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 OR52I2Q8NH67 350 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 RFESDQ8TAC1 157 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 C8orf46Q8TAG6 207 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 C15orf40Q8WUR7 153 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 MSI2Q96DH6 328 aaKnown RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 SOSTQ9BQB4 213 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 RIMS4Q9H426 269 aaPredicted RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 NCOR1P1Q9H4R4 102 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 Q9N2K0 584 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 OR6C3Q9NZP0 311 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 ONECUT1Q9UBC0 465 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 LPAR3Q9UBY5 353 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 LINC00312Q9Y6C7 94 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 V9GYH0 126 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 CR1P17927 2039 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 NAV2Q8IVL1 2488 aa6.35□□□□□ -1.39
SMG1-214ENST00000568038 YLPM1P49750 1951 aaKnown RBP6.35□□□□□ -1.39
SMG1-214ENST00000568038 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.39
SMG1-214ENST00000568038 LRBAP50851 2863 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 IGKV1D-8A0A087WSZ0 117 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 TRBV6-6A0A0A6YYG2 114 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 KIR2DS1A0A191URI9 304 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 A0A1W2PPH5 198 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 TPPPO94811 219 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 LPLP06858 475 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 ZNF728P0DKX0 622 aa6.34□□□□□ -1.39
SMG1-214ENST00000568038 VSIG10L2P0DP72 767 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms