RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TGIF2LXQ8IUE1 241 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 IZUMO1Q8IYV9 350 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 OR4X2Q8NGF9 303 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 OR6M1Q8NGM8 313 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 CHPT1Q8WUD6 406 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 MUL1Q969V5 352 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ST6GALNAC6Q969X2 333 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 TM2D1Q9BX74 207 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ACOT13Q9NPJ3 140 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ZFP57Q9NU63 452 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ETAA1Q9NY74 926 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ZNF580Q9UK33 172 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 TRAPPC2LQ9UL33 140 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 TSSC4Q9Y5U2 329 aaPredicted RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 PEX16Q9Y5Y5 336 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 KIAA2026Q5HYC2 2103 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 WNK1Q9H4A3 2382 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 A0A1W2PPI3 338 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 MEX3AA1L020 520 aaKnown RBP8.92□□□□□ -0.98
CDH3-206ENST00000567674 PTGES3LE9PB15 166 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 SDCBPO00560 298 aaPredicted RBP8.92□□□□□ -0.98
CDH3-206ENST00000567674 HSPB6O14558 160 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 ITGB1BP1O14713 200 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 SLC22A1O15245 554 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 RGS10O43665 173 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 CRTAPO75718 401 aaPredicted RBP8.92□□□□□ -0.98
CDH3-206ENST00000567674 MAS1P04201 325 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 AMY1AP04745 511 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 AMY2AP04746 511 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 CPEP16870 476 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 HSD17B12Q53GQ0 312 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 SYT6Q5T7P8 510 aaPredicted RBP8.92□□□□□ -0.98
CDH3-206ENST00000567674 FAM71F2Q6NXP2 309 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 OR2W3Q7Z3T1 314 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 OR5AU1Q8NGC0 362 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 OR13C5Q8NGS8 318 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 OR2T10Q8NGZ9 312 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 NEK7Q8TDX7 302 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 SELENOIQ9C0D9 397 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 SIGLEC9Q9Y336 463 aa8.92□□□□□ -0.98
CDH3-206ENST00000567674 TRBV6-6A0A0A6YYG2 114 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 IGHV1-3A0A0C4DH29 117 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 HSD17B6O14756 317 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 LANCL1O43813 399 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 YPEL1O60688 119 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 TSPAN15O95858 294 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 IGHG2P01859 326 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 CRHBPP24387 322 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 PAX6P26367 422 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 HTR2CP28335 458 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 SSTR5P35346 364 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 RPS27AP62979 156 aaKnown RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 MED22Q15528 200 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 ABCA11PQ4W5N1 156 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 PLA1AQ53H76 456 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 BAIAP2L2Q6UXY1 529 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 MOB1BQ7L9L4 216 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 CEACAM19Q7Z692 300 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 FAM89BQ8N5H3 189 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 ZFP41Q8N8Y5 198 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 RFESDQ8TAC1 157 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 NEDD4LQ96PU5 975 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 YPEL2Q96QA6 119 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 URM1Q9BTM9 101 aaKnown RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 YTHDF1Q9BYJ9 559 aaKnown RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 GPR61Q9BZJ8 451 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDH3-206ENST00000567674 LIN7CQ9NUP9 197 aaKnown RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 ZMAT5Q9UDW3 170 aaKnown RBP8.91□□□□□ -0.98
CDH3-206ENST00000567674 HSF4Q9ULV5 492 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 RAB26Q9ULW5 256 aa8.91□□□□□ -0.98
CDH3-206ENST00000567674 TMEM14DPA8MWL7 114 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 C12orf77C9JDV5 145 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 DIRAS3O95661 229 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 SNRNP70P08621 437 aaKnown RBP8.9□□□□□ -0.98
CDH3-206ENST00000567674 TMEM11P17152 192 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 SLC35B1P78383 322 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 TBCEQ15813 527 aaPredicted RBP8.9□□□□□ -0.98
CDH3-206ENST00000567674 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 FOXRED2Q8IWF2 684 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 Q8N6K4 173 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 C5orf56Q8N8D9 126 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 ZNF439Q8NDP4 499 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 TMEM104Q8NE00 496 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 FAM110DQ8TAY7 271 aaPredicted RBP8.9□□□□□ -0.98
CDH3-206ENST00000567674 GALMQ96C23 342 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 TMEM59Q9BXS4 323 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 ABCG5Q9H222 651 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 ING3Q9NXR8 418 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 GNG12Q9UBI6 72 aa8.9□□□□□ -0.98
CDH3-206ENST00000567674 NKX1-2Q9UD57 310 aaPredicted RBP8.9□□□□□ -0.98
CDH3-206ENST00000567674 A0A1W2PP11 408 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 A0A1W2PPK0 400 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 MAGEA13PA6NCF6 341 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 ADARB2-AS1A8MUL3 147 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 SLC17A2O00624 439 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms