RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ID4P47928 161 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 HOXA1P49639 335 aaPredicted RBP15.05■□□□□ 0
CMTM3-214ENST00000567572 PPT1P50897 306 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 NHLH1Q02575 133 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 TBC1D28Q2M2D7 210 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 ZNF324BQ6AW86 544 aaPredicted RBP15.05■□□□□ 0
CMTM3-214ENST00000567572 DPPA3Q6W0C5 159 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 HSD17B11Q8NBQ5 300 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 OR10J5Q8NHC4 309 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 IL36RNQ9UBH0 155 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 POLDIP2Q9Y2S7 368 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 DCHS1Q96JQ0 3298 aa15.05■□□□□ 0
CMTM3-214ENST00000567572 TRAV24A0A0B4J272 114 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 A0A1B0GU03 582 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 PGLYRP1O75594 196 aaPredicted RBP15.05■□□□□ -0
CMTM3-214ENST00000567572 KIR2DL2P43627 348 aaPredicted RBP15.05■□□□□ -0
CMTM3-214ENST00000567572 POLR2GP62487 172 aaKnown RBP eCLIP15.05■□□□□ -0
CMTM3-214ENST00000567572 MRPL49Q13405 166 aaKnown RBP15.05■□□□□ -0
CMTM3-214ENST00000567572 CLEC9AQ6UXN8 241 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 Q6ZT83 130 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 MDP1Q86V88 176 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 BATF2Q8N1L9 274 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 RBMXL3Q8N7X1 1067 aaKnown RBP15.05■□□□□ -0
CMTM3-214ENST00000567572 SH3BGRL3Q9H299 93 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 CCL28Q9NRJ3 127 aa15.05■□□□□ -0
CMTM3-214ENST00000567572 CACNA1GO43497 2377 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 FAM24AA6NFZ4 105 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 K7EM74 188 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 RHEBQ15382 184 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 LINC00518Q8N0U6 118 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 EIF5A2Q9GZV4 153 aaKnown RBP15.04■□□□□ -0
CMTM3-214ENST00000567572 SLC35B3Q9H1N7 401 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 UNKLQ9H9P5 680 aaKnown RBP15.04■□□□□ -0
CMTM3-214ENST00000567572 DKK4Q9UBT3 224 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 PTPRZ1P23471 2315 aaPredicted RBP15.04■□□□□ -0
CMTM3-214ENST00000567572 URB1O60287 2271 aaKnown RBP15.04■□□□□ -0
CMTM3-214ENST00000567572 COLCA2A8K830 154 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 WRBO00258 174 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 SSSCA1O60232 199 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 NFYBP25208 207 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 TGFBR3Q03167 851 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 RNF212Q495C1 297 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 PLPPR1Q8TBJ4 325 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 RXFP4Q8TDU9 374 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 LSM10Q969L4 123 aaKnown RBP15.04■□□□□ -0
CMTM3-214ENST00000567572 SCNM1Q9BWG6 230 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 WASF3Q9UPY6 502 aa15.04■□□□□ -0
CMTM3-214ENST00000567572 SHANK1Q9Y566 2161 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 MEX3AA1L020 520 aaKnown RBP15.03■□□□□ -0
CMTM3-214ENST00000567572 HSD17B6O14756 317 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 DFFBO76075 338 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 ATP6V0CP27449 155 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 TMEM182Q6ZP80 229 aaPredicted RBP15.03■□□□□ -0
CMTM3-214ENST00000567572 CNEP1R1Q8N9A8 125 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 OR2G3Q8NGZ4 309 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 RAB40CQ96S21 281 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 DOCK7Q96N67 2140 aa15.03■□□□□ -0
CMTM3-214ENST00000567572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.02■□□□□ -0
CMTM3-214ENST00000567572 ZNF14P17017 642 aaPredicted RBP15.02■□□□□ -0
CMTM3-214ENST00000567572 COX5AP20674 150 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 CD200P41217 278 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 GABRA6Q16445 453 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 Q6P435 159 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 VWA1Q6PCB0 445 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 OR1J1Q8NGS3 322 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 FAM213BQ8TBF2 198 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 SAV1Q9H4B6 383 aaPredicted RBP15.02■□□□□ -0
CMTM3-214ENST00000567572 KCNJ16Q9NPI9 418 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 RNF115Q9Y4L5 304 aa15.02■□□□□ -0
CMTM3-214ENST00000567572 LAMA5O15230 3695 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 BOD1L1Q8NFC6 3051 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 HSPB6O14558 160 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 LYZL6O75951 148 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 IFNA4P05014 189 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 CRYBA1P05813 215 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 SERPINE2P07093 398 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 ACAA1P09110 424 aaPredicted RBP15.02□□□□□ -0.01
CMTM3-214ENST00000567572 SELEP16581 610 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 ERVK11-1P61568 191 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 CXorf66Q5JRM2 361 aaPredicted RBP15.02□□□□□ -0.01
CMTM3-214ENST00000567572 STX12Q86Y82 276 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 OR10V1Q8NGI7 309 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 OR5C1Q8NGR4 320 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 ATP5SQ99766 215 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 PARP12Q9H0J9 701 aaKnown RBP15.02□□□□□ -0.01
CMTM3-214ENST00000567572 KIAA1456Q9P272 454 aa15.02□□□□□ -0.01
CMTM3-214ENST00000567572 MGAQ8IWI9 3026 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 MT-ND4LP03901 98 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 CA6P23280 308 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 RAB5BP61020 215 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 FOXF2Q12947 444 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 CLINT1Q14677 625 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 OR2T2Q6IF00 324 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 TMEM171Q8WVE6 324 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 RDH5Q92781 318 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 TAAR3PQ9P1P4 343 aa15.01□□□□□ -0.01
CMTM3-214ENST00000567572 MBD3L4A6NDZ8 208 aaPredicted RBP15□□□□□ -0.01
CMTM3-214ENST00000567572 MBD3L3A6NE82 208 aaPredicted RBP15□□□□□ -0.01
CMTM3-214ENST00000567572 MBD3L5A6NJ08 208 aaPredicted RBP15□□□□□ -0.01
CMTM3-214ENST00000567572 TMEM210A6NLX4 147 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms