RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 KCNK15Q9H427 330 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 SERTAD4Q9NUC0 356 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 ETAA1Q9NY74 926 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 TRAPPC2LQ9UL33 140 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 PSG11Q9UQ72 335 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 IGHV3-72A0A0B4J1Y9 119 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 MCRIP1C9JLW8 97 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 J3QR06 171 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 HSD17B6O14756 317 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 PIN1P1O15428 100 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 TMEM11P17152 192 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 CD34P28906 385 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 KCNJ3P48549 501 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 DYNLT3P51808 116 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 MADCAM1Q13477 382 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 GPR176Q14439 515 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 ACSM3Q53FZ2 586 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 C6orf141Q5SZD1 244 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 LIPKQ5VXJ0 399 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 IZUMO2Q6UXV1 221 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 ASCL4Q6XD76 172 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 CEACAM19Q7Z692 300 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 MOB3BQ86TA1 216 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 LINC00596Q86U02 117 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 MFSD4AQ8N468 514 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 NKAIN3Q8N8D7 197 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 DTX3Q8N9I9 347 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 TMEM104Q8NE00 496 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 UFD1Q92890 307 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 R3HDM4Q96D70 268 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 PLCXD1Q9NUJ7 323 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 GNG12Q9UBI6 72 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 PEX16Q9Y5Y5 336 aa8.09□□□□□ -1.11
GTF3C1-206ENST00000566779 CCRL2O00421 344 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 RGS10O43665 173 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 OR2F2O95006 317 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 IGKV1D-33P01593 117 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 IGKV1-33P01594 117 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM106CPP0CH98 169 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 SPHARQ15513 63 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 NHLRC3Q5JS37 347 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 SYT6Q5T7P8 510 aaPredicted RBP8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 OR10K2Q6IF99 312 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 CENPVQ7Z7K6 275 aaPredicted RBP8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 OR5AU1Q8NGC0 362 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 OR1L1Q8NH94 360 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 SETD6Q8TBK2 473 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 THRSPQ92748 146 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 CNBD2Q96M20 576 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 CST11Q9H112 138 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 VCX3BQ9H321 246 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 SPACA1Q9HBV2 294 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 CHMP1AQ9HD42 196 aaPredicted RBP8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 FKBP14Q9NWM8 211 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 MOB4Q9Y3A3 225 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 TPRKBQ9Y3C4 175 aa8.08□□□□□ -1.12
GTF3C1-206ENST00000566779 VWFP04275 2813 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 A0A087X0M5 115 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 A0A1B0GX30 115 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 A0A1W2PPI3 338 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A22PA8MWA6 464 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 C12orf77C9JDV5 145 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 SPINT2O43291 252 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 PRB2P02812 416 aaPredicted RBP8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 CGB3P0DN86 165 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 CGB7P0DN87 165 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 PF4V1P10720 104 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 IL3RAP26951 378 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 MAP2K4P45985 399 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 RPS25P62851 125 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 P2RY14Q15391 338 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 HSD17B12Q53GQ0 312 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 C6orf183Q5T699 404 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 GLT8D1Q68CQ7 371 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 ZNF497Q6ZNH5 498 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 C16orf82Q7Z2V1 217 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 Q8N2B8 174 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 Q8NFD4 153 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 CFHR4Q92496 578 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 RBMXL1Q96E39 390 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 RBM14Q96PK6 669 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 NEDD4LQ96PU5 975 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 PLGRKTQ9HBL7 147 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 KCNIP1Q9NZI2 227 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 NOTCH3Q9UM47 2321 aa8.07□□□□□ -1.12
GTF3C1-206ENST00000566779 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 TCRBV4S1A1TA0A5B7 111 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 OOSP1A8MZH6 123 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 NPIPB11E5RHQ5 1161 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 G3V4G9 280 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 LY6LH3BQJ8 138 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 SLC31A2O15432 143 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 GPX5O75715 221 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 MT-ND4P03905 459 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 RCC1P18754 421 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 RAB7AP51149 207 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 GNMTQ14749 295 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms