RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 HLA-HP01893 362 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 HBE1P02100 147 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 F2RP25116 425 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 AKR1C3P42330 323 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 B2MP61769 119 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 SNRPEP62304 92 aaKnown RBP14.28□□□□□ -0.12
CMTM3-213ENST00000566756 AKIRIN2Q53H80 203 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 TUSC5Q8IXB3 177 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 ODF3L1Q8IXM7 274 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 APH1AQ96BI3 265 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 RBMXL1Q96E39 390 aaKnown RBP14.28□□□□□ -0.12
CMTM3-213ENST00000566756 PRRG4Q9BZD6 226 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 CCL28Q9NRJ3 127 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 GLRX2Q9NS18 164 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 OR2W1Q9Y3N9 320 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 CCNOP22674 350 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 DYNLT3P51808 116 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 RAB2AP61019 212 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF324BQ6AW86 544 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-213ENST00000566756 H1FOOQ8IZA3 346 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-213ENST00000566756 CD300LFQ8TDQ1 290 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 NEK7Q8TDX7 302 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 ATP5SQ99766 215 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 TREM2Q9NZC2 230 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 CRIM1Q9NZV1 1036 aa14.27□□□□□ -0.12
CMTM3-213ENST00000566756 A0A087WWC5 75 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 A0A096LPE4 126 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 A0A1W2PPH5 198 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 A0A1W2PPZ6 126 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 ANKRD30BLA7E2S9 258 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 WRBO00258 174 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 DEGS1O15121 323 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 HSPB1P04792 205 aaKnown RBP14.27□□□□□ -0.13
CMTM3-213ENST00000566756 GNG3P63215 75 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 HLA-DRB3P79483 266 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 TLE4Q04727 773 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 YPEL4Q96NS1 127 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 HS3ST6Q96QI5 342 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 RAB40CQ96S21 281 aa14.27□□□□□ -0.13
CMTM3-213ENST00000566756 TRAV1-1A0A0B4J248 108 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 A6NLC8 198 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 HSD17B6O14756 317 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 TMEM50AO95807 157 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 ACAA1P09110 424 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-213ENST00000566756 MDH2P40926 338 aaKnown RBP14.26□□□□□ -0.13
CMTM3-213ENST00000566756 ZNF506Q5JVG8 444 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 MOB1BQ7L9L4 216 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 LSM10Q969L4 123 aaKnown RBP14.26□□□□□ -0.13
CMTM3-213ENST00000566756 CALHM2Q9HA72 323 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 TAAR3PQ9P1P4 343 aa14.26□□□□□ -0.13
CMTM3-213ENST00000566756 J3QW42 95 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 SYNGR1O43759 233 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 CHST1O43916 411 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 IGHV2-5P01817 119 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 ZNF14P17017 642 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-213ENST00000566756 PAX9P55771 341 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 TAS2R30P59541 319 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 NHLH1Q02575 133 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 DEFB109BQ30KR1 87 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 KRBOX4Q5JUW0 171 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 STX12Q86Y82 276 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 OR10G4Q8NGN3 311 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 OR10J5Q8NHC4 309 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 MAGT1Q9H0U3 335 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 ZNF503-AS2A6NEH8 195 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 SRP19P09132 144 aaKnown RBP14.25□□□□□ -0.13
CMTM3-213ENST00000566756 OMGP23515 440 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 ASCL1P50553 236 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 RPL23AP62750 156 aaKnown RBP14.25□□□□□ -0.13
CMTM3-213ENST00000566756 SRYQ05066 204 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 BATF2Q8N1L9 274 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 C20orf24Q9BUV8 137 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 SEBOXQ9HB31 216 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-213ENST00000566756 IL36RNQ9UBH0 155 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 WSB1Q9Y6I7 421 aa14.25□□□□□ -0.13
CMTM3-213ENST00000566756 ARID1AO14497 2285 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 TRGV5A0A0B4J1U4 118 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 TRAV24A0A0B4J272 114 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 TRAV17A0A0B4J275 112 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 GPR37O15354 613 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
CMTM3-213ENST00000566756 CCL2P13500 99 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 ACSF3Q4G176 576 aaPredicted RBP14.24□□□□□ -0.13
CMTM3-213ENST00000566756 RNFT1Q5M7Z0 435 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 ISOC2Q96AB3 205 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 RARRES2Q99969 163 aa14.24□□□□□ -0.13
CMTM3-213ENST00000566756 KIAA1324LA8MWY0 1029 aaPredicted RBP14.23□□□□□ -0.13
CMTM3-213ENST00000566756 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.23□□□□□ -0.13
CMTM3-213ENST00000566756 TXNL1O43396 289 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 NGFP01138 241 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 APLNRP35414 380 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 RPS23P62266 143 aaKnown RBP14.23□□□□□ -0.13
CMTM3-213ENST00000566756 CCL20P78556 96 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 KHDC3LQ587J8 217 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 C9orf135Q5VTT2 229 aa14.23□□□□□ -0.13
CMTM3-213ENST00000566756 FAM24BQ8N5W8 94 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms