RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CDH26Q8IXH8 852 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 PQLC1Q8N2U9 271 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
RNF40-209ENST00000566703 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
RNF40-209ENST00000566703 IGHV3-72A0A0B4J1Y9 119 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 AIPO00170 330 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 SPINT2O43291 252 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 CA11O75493 328 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 GLAP06280 429 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 MYL12AP19105 171 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 REG1BP48304 166 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 MED21Q13503 144 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 GPR50Q13585 617 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 SLC22A6Q4U2R8 563 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 YIF1BQ5BJH7 314 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 OR2G6Q5TZ20 316 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 C11orf87Q6NUJ2 197 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 SLC25A48Q6ZT89 311 aaKnown RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 NEK7Q8TDX7 302 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 CCDC107Q8WV48 283 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 GHSRQ92847 366 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 S1PR3Q99500 378 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 ZNF184Q99676 751 aaPredicted RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 CHCHD6Q9BRQ6 235 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 RCC2Q9P258 522 aaKnown RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 CKLFQ9UBR5 152 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 TRAPPC2LQ9UL33 140 aa11.78□□□□□ -0.52
RNF40-209ENST00000566703 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
RNF40-209ENST00000566703 FAM90A10PA6NDY2 464 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 FAM90A7PA6NKC0 464 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 FAM90A23PA8MXZ1 464 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 VHLP40337 213 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 SMN1Q16637 294 aaKnown RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 Q499Y3 187 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 SYT6Q5T7P8 510 aaPredicted RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 DMKNQ6E0U4 476 aaPredicted RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 GAPTQ8N292 157 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 ZNF439Q8NDP4 499 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 OR8U1Q8NH10 309 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
RNF40-209ENST00000566703 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.53
RNF40-209ENST00000566703 A0A1W2PP11 408 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 IGHG4P01861 327 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 IGF1P05019 195 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 RPLP1P05386 114 aaKnown RBP11.76□□□□□ -0.53
RNF40-209ENST00000566703 FSTP19883 344 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
RNF40-209ENST00000566703 CT45A1Q5HYN5 189 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 C9orf66Q5T8R8 295 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 ZNF554Q86TJ5 538 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 CT45A3Q8NHU0 189 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 ETAA1Q9NY74 926 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 GNG12Q9UBI6 72 aa11.76□□□□□ -0.53
RNF40-209ENST00000566703 TRBV5-7A0A0A0MS05 114 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 IGHV3-43A0A0B4J1X8 118 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 LANCL1O43813 399 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 SC5DO75845 299 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 LALBAP00709 142 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 OR5H8P0DN80 308 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 IGHV3-43DP0DP04 118 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 SOX6P35712 828 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 CFHR3Q02985 330 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 TTC23Q5W5X9 447 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 FAM53AQ6NSI3 398 aaPredicted RBP11.75□□□□□ -0.53
RNF40-209ENST00000566703 GLIPR1L1Q6UWM5 242 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 ZNF485Q8NCK3 441 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 OR13C5Q8NGS8 318 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 UBALD1Q8TB05 177 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 TMEM80Q96HE8 168 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 MRPS28Q9Y2Q9 187 aaKnown RBP11.75□□□□□ -0.53
RNF40-209ENST00000566703 PEX16Q9Y5Y5 336 aa11.75□□□□□ -0.53
RNF40-209ENST00000566703 TRAV8-7A0A075B6U6 113 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
RNF40-209ENST00000566703 SLC31A2O15432 143 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 HBZP02008 142 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 CD1AP06126 327 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 FUT3P21217 361 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 VDAC1P21796 283 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 ZNF134P52741 427 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 F2RL1P55085 397 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 TAS2R43P59537 309 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 MORN2Q502X0 79 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 RAB12Q6IQ22 244 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms