RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RGS5O15539 181 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 SC5DO75845 299 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 IL9P15248 144 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 CSRP1P21291 193 aaKnown RBP1.47□□□□□ -2.17
PALB2-203ENST00000565038 RANBP1P43487 201 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 ETV1P50549 477 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 MLF1P58340 268 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 UBE2KP61086 200 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 STX4Q12846 297 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 TTC32Q5I0X7 151 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 AADACL4Q5VUY2 407 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 TCF24Q7RTU0 167 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 PID1Q7Z2X4 250 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 LYPD6Q86Y78 171 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 AMN1Q8IY45 258 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 ATPAF2Q8N5M1 289 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 LINC00337Q8N6G1 96 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 ZNF555Q8NEP9 628 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 OR6N2Q8NGY6 317 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 C22orf15Q8WYQ4 148 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 CDKL2Q92772 493 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 GLT1D1Q96MS3 346 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 C20orf166-AS1Q96NR2 134 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 C20orf144Q9BQM9 153 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 MAP1LC3CQ9BXW4 147 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 SLC38A1Q9H2H9 487 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 XKR8Q9H6D3 395 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 SDHAF2Q9NX18 166 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 ZNF443Q9Y2A4 671 aaPredicted RBP1.47□□□□□ -2.17
PALB2-203ENST00000565038 RBMX2Q9Y388 322 aaKnown RBP1.47□□□□□ -2.17
PALB2-203ENST00000565038 MYO9BQ13459 2157 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 LAMB4A4D0S4 1761 aa1.47□□□□□ -2.17
PALB2-203ENST00000565038 USP34Q70CQ2 3546 aa1.46□□□□□ -2.17
PALB2-203ENST00000565038 AKAP11Q9UKA4 1901 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 TRIOO75962 3097 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 PLXNB2O15031 1838 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 LOC100506127A0A0U1RQW1 187 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 A0A1B0GW15 77 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 ANKRD20A5PA0PJZ0 165 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 E7EWF7 191 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 PSCAO43653 123 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 ALOX12BO75342 701 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 OR2A4O95047 310 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 IGKV1D-33P01593 117 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 IGKV1-33P01594 117 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 SNRPAP09012 282 aaKnown RBP1.46□□□□□ -2.18
PALB2-203ENST00000565038 IFI30P13284 250 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 LGALS7P47929 136 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 DYNC1I2Q13409 638 aaKnown RBP1.46□□□□□ -2.18
PALB2-203ENST00000565038 Q3ZCU0 254 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 CCNYL1Q8N7R7 359 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 OR4K2Q8NGD2 314 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 OR2K2Q8NGT1 345 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 ADTRPQ96IZ2 230 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 SMIM8Q96KF7 97 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 SPACA5Q96QH8 159 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 OR2A7Q96R45 310 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 TRIB3Q96RU7 358 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 METTL26Q96S19 204 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 TMED9Q9BVK6 235 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 HIGD2AQ9BW72 106 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 SRRQ9GZT4 340 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 CXCL16Q9H2A7 254 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 RBM22Q9NW64 420 aaKnown RBP eCLIP1.46□□□□□ -2.184e-7■■□□□ 11.6
PALB2-203ENST00000565038 TAC3Q9UHF0 121 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 PRO0628Q9UI54 55 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 Q9Y3F1 56 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 C2orf16Q68DN1 1984 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 ROBO3Q96MS0 1386 aa1.46□□□□□ -2.18
PALB2-203ENST00000565038 PRRC2BQ5JSZ5 2229 aaKnown RBP1.46□□□□□ -2.18
PALB2-203ENST00000565038 WDFY4Q6ZS81 3184 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 PTPRZ1P23471 2315 aaPredicted RBP1.45□□□□□ -2.18
PALB2-203ENST00000565038 SPEF2Q9C093 1822 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 MYH13Q9UKX3 1938 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 GMNCA6NCL1 334 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 MGAT4DA6NG13 374 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 K7ERS5 55 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 PRMT5O14744 637 aaPredicted RBP1.45□□□□□ -2.18
PALB2-203ENST00000565038 SPOPO43791 374 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 IGKV1-16P04430 117 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 OR5AL1P0C617 328 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 GIMD1P0DJR0 217 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 SMIM10L2AP0DMW4 78 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 SMIM10L2BP0DMW5 78 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 PTHLHP12272 177 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CD52P31358 61 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 SLC18A1P54219 525 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 MGAT3Q09327 533 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 ITGB3BPQ13352 177 aaPredicted RBP1.45□□□□□ -2.18
PALB2-203ENST00000565038 GPR176Q14439 515 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 TMEM241Q24JQ0 296 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CLEC18BQ6UXF7 455 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CLEC19AQ6UXS0 136 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 Q6ZQT7 251 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 RBM45Q8IUH3 476 aaKnown RBP1.45□□□□□ -2.18
PALB2-203ENST00000565038 ZFP82Q8N141 532 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CYP4Z2PQ8N1L4 340 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 TCAIMQ8N3R3 496 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 RPRMLQ8N4K4 120 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms