RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 IFNA6P05013 189 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 WNT2P09544 360 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 SCTP09683 121 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 GSTT2P0CG29 244 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 DSCR9P59020 149 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 CDK10Q15131 360 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 VAX1Q5SQQ9 334 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 TRAT1Q6PIZ9 186 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF782Q6ZMW2 699 aaPredicted RBP9.17□□□□□ -0.94
SF3B3-205ENST00000564899 LRRC75A-AS1Q8N1F1 130 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 PRR18Q8N4B5 295 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 OR4A4PQ8NGN8 299 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 OR56B4Q8NH76 319 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 ENKURQ8TC29 256 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 C10orf105Q8TEF2 133 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 DCTN5Q9BTE1 182 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 NCOR1P1Q9H4R4 102 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 PATZ1Q9HBE1 687 aaKnown RBP9.17□□□□□ -0.94
SF3B3-205ENST00000564899 TAF9BQ9HBM6 251 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 NECAP2Q9NVZ3 263 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 CLN8Q9UBY8 286 aa9.17□□□□□ -0.94
SF3B3-205ENST00000564899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.94
SF3B3-205ENST00000564899 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 C12orf77C9JDV5 145 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 SDCBPO00560 298 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-205ENST00000564899 OR5H8P0DN80 308 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 BTCP35070 178 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 RFX2P48378 723 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 NPY4RP50391 375 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 SEC61A1P61619 476 aaKnown RBP9.16□□□□□ -0.94
SF3B3-205ENST00000564899 RPL31P62899 125 aaKnown RBP9.16□□□□□ -0.94
SF3B3-205ENST00000564899 MEF2CQ06413 473 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-205ENST00000564899 WDR25Q64LD2 544 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF841Q6ZN19 808 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 C5orf24Q7Z6I8 188 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 NRARPQ7Z6K4 114 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF554Q86TJ5 538 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 FAM185AQ8N0U4 392 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF565Q8N9K5 539 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 UBALD1Q8TB05 177 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 CABLES2Q9BTV7 478 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 DPAGT1Q9H3H5 408 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 C19orf12Q9NSK7 152 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 LPAR3Q9UBY5 353 aa9.16□□□□□ -0.94
SF3B3-205ENST00000564899 IGHV4-30-2A0A087WSY4 118 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 IGKV1-6A0A0C4DH72 117 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 VWC2LB2RUY7 222 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 BET1O15155 118 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 GPR37O15354 613 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SPINT2O43291 252 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 IGHV2-5P01817 119 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 HBZP02008 142 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 CTXN2P0C2S0 81 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF735P0CB33 412 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SLC6A1P30531 599 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 IL2RGP31785 369 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SSTR5P35346 364 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 CCR6P51684 374 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 TSPAN5P62079 268 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 GNB2P62879 340 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 HERPUD1Q15011 391 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 OXA1LQ15070 435 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 CLEC12BQ2HXU8 276 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 TRIM16LQ309B1 348 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SCGB2B2Q4G0G5 96 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 ESCO2Q56NI9 601 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 IGSF11Q5DX21 431 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 PRSS57Q6UWY2 283 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 BTN2A1Q7KYR7 527 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 TCF23Q7RTU1 214 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 OVCH2Q7RTZ1 564 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 GLCCI1Q86VQ1 547 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 TMEM17Q86X19 198 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 ARRDC1Q8N5I2 433 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 OR51S1Q8NGJ8 323 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 OR1L1Q8NH94 360 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 CLDND2Q8NHS1 167 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 IL1F10Q8WWZ1 152 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 ARL11Q969Q4 196 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 KIRREL1Q96J84 757 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SLC6A7Q99884 636 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 PRRT1Q99946 306 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SSBP3Q9BWW4 388 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-205ENST00000564899 RAB9BQ9NP90 201 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 SCP2D1Q9UJQ7 156 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 MEGF8Q7Z7M0 2845 aa9.15□□□□□ -0.94
SF3B3-205ENST00000564899 KBTBD11-OT1A0A1B0GTJ5 212 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 C15orf65H3BRN8 121 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 PHF1O43189 567 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-205ENST00000564899 SPNP16150 400 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 GZMHP20718 246 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF273Q14593 569 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 CR1LQ2VPA4 569 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 PLA1AQ53H76 456 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 TMEM200BQ69YZ2 307 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms