RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MOSP00540 346 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 THBS3P49746 956 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF137PP52743 207 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 GP2P55259 537 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 ADARB1P78563 741 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 ST3GAL4Q11206 333 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 DCTN2Q13561 401 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 DOC2BQ14184 412 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 DIAPH2-AS1Q14236 149 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 C10orf99Q6UWK7 81 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 OR2W3Q7Z3T1 314 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF329Q86UD4 541 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 GAPTQ8N292 157 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 STPG2Q8N412 459 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 Q8N6K4 173 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 NEK7Q8TDX7 302 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 CYGBQ8WWM9 190 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 GGHQ92820 318 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 PGLYRP3Q96LB9 341 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 UQCC2Q9BRT2 126 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 ABCG5Q9H222 651 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 PLCXD1Q9NUJ7 323 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 TRAPPC2LQ9UL33 140 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 MRPS28Q9Y2Q9 187 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 LRRC42Q9Y546 428 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 TRAV39A0A0B4J263 110 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 MPIG6BO95866 241 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 LALBAP00709 142 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 FUT3P21217 361 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 MAPK3P27361 379 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 CAPGP40121 348 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 PNLIPRP3Q17RR3 467 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 SYT6Q5T7P8 510 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 GLIPR1L1Q6UWM5 242 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 UNQ9370/PRO34162Q6UXP9 181 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 SLC25A48Q6ZT89 311 aaKnown RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 MRPL41Q8IXM3 137 aaKnown RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 JAGN1Q8N5M9 183 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 NKAIN3Q8N8D7 197 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 CCDC107Q8WV48 283 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 RTN4IP1Q8WWV3 396 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 NOL4LQ96MY1 436 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 RASL11BQ9BPW5 248 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 ETAA1Q9NY74 926 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF581Q9P0T4 197 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 PEX16Q9Y5Y5 336 aa9.62□□□□□ -0.87
GTF3C1-204ENST00000564664 TRAV8-7A0A075B6U6 113 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 A0A1W2PPE3 182 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 C12orf77C9JDV5 145 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 SC5DO75845 299 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 GPR12P47775 334 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 LY6G6FQ5SQ64 297 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 RAB12Q6IQ22 244 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF695Q8IW36 515 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 Q8N9W7 124 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 TMEM104Q8NE00 496 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 OR13C5Q8NGS8 318 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 MUL1Q969V5 352 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 GNG12Q9UBI6 72 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 PSORS1C1Q9UIG5 152 aa9.61□□□□□ -0.87
GTF3C1-204ENST00000564664 A0A1W2PP11 408 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 NUDT19A8MXV4 375 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 K7EIL1 84 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 LANCL1O43813 399 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 ELANEP08246 267 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 UBBP0CG47 229 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 REG1BP48304 166 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 WNT4P56705 351 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 FOXE3Q13461 319 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 LRRC36Q1X8D7 754 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 CT45A1Q5HYN5 189 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 RNLSQ5VYX0 342 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 AWAT2Q6E213 333 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 LYPD6Q86Y78 171 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 C8orf59Q8N0T1 100 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 MS4A15Q8N5U1 240 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF439Q8NDP4 499 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 CT45A3Q8NHU0 189 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 ORAI1Q96D31 301 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 DERL3Q96Q80 235 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 OR14A2Q96R54 314 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 S1PR3Q99500 378 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 P2RX4Q99571 388 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 SELENOIQ9C0D9 397 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 CST11Q9H112 138 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 MBNL3Q9NUK0 354 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 ERGIC3Q9Y282 383 aa9.6□□□□□ -0.87
GTF3C1-204ENST00000564664 MYL12BO14950 172 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 RAMP3O60896 148 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 CRTAPO75718 401 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 RGS11O94810 467 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 HBZP02008 142 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms