RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CMSS1Q9BQ75 279 aaKnown RBP13.58□□□□□ -0.24
RNF40-206ENST00000564260 ATG5Q9H1Y0 275 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 ABCG5Q9H222 651 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 ZNRD1Q9P1U0 126 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 A0A0U1RQK1 487 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 SMIM30A4D0T7 59 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 TOR1AO14656 332 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 ARG1P05089 322 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 CD3GP09693 182 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 COX7A1P24310 79 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 HTR1DP28221 377 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 DYNLT3P51808 116 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 BAMBIQ13145 260 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 HMGN3Q15651 99 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 Q6ZS49 121 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 BCL6BQ8N143 479 aaPredicted RBP13.57□□□□□ -0.24
RNF40-206ENST00000564260 LINC00311Q8N616 119 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 OR4K15Q8NH41 348 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 C22orf15Q8WYQ4 148 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 GALMQ96C23 342 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 ZNF48Q96MX3 618 aaPredicted RBP13.57□□□□□ -0.24
RNF40-206ENST00000564260 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 TAF9BQ9HBM6 251 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 CHMP1AQ9HD42 196 aaPredicted RBP13.57□□□□□ -0.24
RNF40-206ENST00000564260 DIABLOQ9NR28 239 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 GFOD1Q9NXC2 390 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 AK3Q9UIJ7 227 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 JPT1Q9UK76 154 aa13.57□□□□□ -0.24
RNF40-206ENST00000564260 CUBNO60494 3623 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 A0A0B4J203 849 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 BTBD17A6NE02 478 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 MMP23AO75900 390 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 RGS11O94810 467 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 RNASE1P07998 156 aaKnown RBP13.56□□□□□ -0.24
RNF40-206ENST00000564260 OMGP23515 440 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 DTYMKP23919 212 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 SOX6P35712 828 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 KIR2DS4P43632 304 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 LOXL3P58215 753 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 KIR2DS1Q14954 304 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 HLA-DRB5Q30154 266 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 UBE2NLQ5JXB2 153 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 CCDC144NLQ6NUI1 221 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
RNF40-206ENST00000564260 PDZD9Q8IXQ8 264 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 FAM216AQ8WUB2 273 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 CCDC107Q8WV48 283 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 S100A16Q96FQ6 103 aaKnown RBP13.56□□□□□ -0.24
RNF40-206ENST00000564260 MMP28Q9H239 520 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 DPM3Q9P2X0 92 aa13.56□□□□□ -0.24
RNF40-206ENST00000564260 LEUTXA8MZ59 168 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 J3QR06 171 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 ZNF701M0R085 212 aaPredicted RBP13.55□□□□□ -0.24
RNF40-206ENST00000564260 SDCBPO00560 298 aaPredicted RBP13.55□□□□□ -0.24
RNF40-206ENST00000564260 TPPPO94811 219 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 HBZP02008 142 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 MELTFP08582 738 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 ZNF182P17025 639 aaPredicted RBP13.55□□□□□ -0.24
RNF40-206ENST00000564260 RCC1P18754 421 aaPredicted RBP13.55□□□□□ -0.24
RNF40-206ENST00000564260 TGFBR1P36897 503 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 IER3P46695 156 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 PLA2G7Q13093 441 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 HACD4Q5VWC8 232 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 MZT2AQ6P582 158 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 ZDHHC22Q8N966 263 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 SLC25A38Q96DW6 304 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 GHITMQ9H3K2 345 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 KCNK7Q9Y2U2 307 aa13.55□□□□□ -0.24
RNF40-206ENST00000564260 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
RNF40-206ENST00000564260 ITGB1BP1O14713 200 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 XRCC3O43542 346 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 YPEL1O60688 119 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 APOA1P02647 267 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 NFYBP25208 207 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 IL3RAP26951 378 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 DLX1P56177 255 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 UBA52P62987 128 aaKnown RBP13.54□□□□□ -0.24
RNF40-206ENST00000564260 HLA-DRB3P79483 266 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 MOGAT2Q3SYC2 334 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 RFESDQ8TAC1 157 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 AJUBAQ96IF1 538 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 YPEL2Q96QA6 119 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 OCSTAMPQ9BR26 566 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 NAA50Q9GZZ1 169 aaKnown RBP13.54□□□□□ -0.24
RNF40-206ENST00000564260 ZNF286AQ9HBT8 521 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 Q9N2K0 584 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 ATRQ13535 2644 aa13.54□□□□□ -0.24
RNF40-206ENST00000564260 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 BUB1B-PAK6H3BSN5 160 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 VENTXO95231 258 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 GNB3P16520 340 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 TALDO1P37837 337 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 GDNFP39905 211 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms