RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 AIPO00170 330 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 CA11O75493 328 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 SC5DO75845 299 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 KHDC1LQ5JSQ8 128 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 GLIPR1L1Q6UWM5 242 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 OR2W3Q7Z3T1 314 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 MOB3BQ86TA1 216 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 FOXRED2Q8IWF2 684 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 STPG2Q8N412 459 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 OR2T10Q8NGZ9 312 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 FBLIM1Q8WUP2 373 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 CYGBQ8WWM9 190 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 RTN4IP1Q8WWV3 396 aaPredicted RBP13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 ABCG5Q9H222 651 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 PLSCR3Q9NRY6 295 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 PLCXD1Q9NUJ7 323 aa13.58□□□□□ -0.24
VPS9D1-203ENST00000563798 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 K7EIL1 84 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 TXNL1O43396 289 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 IL3RAP26951 378 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 MYCNOSP40205 109 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 KRTAP10-11P60412 298 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 SLC35B1P78383 322 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 DOC2BQ14184 412 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 C6orf183Q5T699 404 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 TRAT1Q6PIZ9 186 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 ZNF554Q86TJ5 538 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 ZFP41Q8N8Y5 198 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 Q8N9W7 124 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 OR8H1Q8NGG4 311 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 CCDC107Q8WV48 283 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 MUL1Q969V5 352 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 DERL3Q96Q80 235 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 OR14A2Q96R54 314 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 P2RX4Q99571 388 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 PSORS1C1Q9UIG5 152 aa13.57□□□□□ -0.24
VPS9D1-203ENST00000563798 AP4M1O00189 453 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 SPINT2O43291 252 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 MPIG6BO95866 241 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 VHLP40337 213 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 GPR12P47775 334 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 REG1BP48304 166 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 LRRC36Q1X8D7 754 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 SYT6Q5T7P8 510 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 RAB12Q6IQ22 244 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 JAGN1Q8N5M9 183 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 NKAIN3Q8N8D7 197 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 THRSPQ92748 146 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 MBNL3Q9NUK0 354 aaKnown RBP13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 ETAA1Q9NY74 926 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 ZNF580Q9UK33 172 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 TRAPPC2LQ9UL33 140 aa13.56□□□□□ -0.24
VPS9D1-203ENST00000563798 IGHV3-72A0A0B4J1Y9 119 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 MOSP00540 346 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 FUT3P21217 361 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 ZNF134P52741 427 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 CT45A1Q5HYN5 189 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 AWAT2Q6E213 333 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 CT45A3Q8NHU0 189 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 UBALD1Q8TB05 177 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 Q96M66 194 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 UQCC2Q9BRT2 126 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 GHRLQ9UBU3 117 aa13.55□□□□□ -0.24
VPS9D1-203ENST00000563798 IGHV3-43A0A0B4J1X8 118 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 NCBP2LA6PVI3 153 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 SLC31A2O15432 143 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 HBZP02008 142 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 MAS1P04201 325 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 IGHV3-43DP0DP04 118 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 MGMTP16455 207 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 CELP19835 753 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 CAPGP40121 348 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 WNT4P56705 351 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 PNLIPRP3Q17RR3 467 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 SIGIRRQ6IA17 410 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 C8orf86Q6ZUL3 223 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 ZNF695Q8IW36 515 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 C8orf59Q8N0T1 100 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 FAM71E2Q8N5Q1 922 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 NANOGP1Q8N7R0 232 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 OR4K15Q8NH41 348 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 S1PR3Q99500 378 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 FKBP14Q9NWM8 211 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
VPS9D1-203ENST00000563798 H0YHG0 523 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms