RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 TTRP02766 147 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 ATP6V1B1P15313 513 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 BLVRBP30043 206 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 HAAOP46952 286 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 HCCSP53701 268 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 MOB3CQ70IA8 216 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 TRAPPC6BQ86SZ2 158 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 ZDHHC13Q8IUH4 622 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 BBS1Q8NFJ9 593 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 OR52N4Q8NGI2 321 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 OR51E1Q8TCB6 317 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 NIPSNAP1Q9BPW8 284 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 GPR84Q9NQS5 396 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 MTCH1Q9NZJ7 389 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 MAGEL2Q9UJ55 1249 aa7.55□□□□□ -1.2
HDGFL3-204ENST00000563790 TCRBV5S2A0A599 114 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 ACOD1A6NK06 481 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 RIIAD1A6NNX1 92 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 TNFRSF11BO00300 401 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 NXPH2O95156 264 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 NRASP01111 189 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 ZNF3P17036 446 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 ROM1Q03395 351 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 ZNF816Q0VGE8 651 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 IL24Q13007 206 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 RPEL1Q2QD12 228 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 C12orf74Q32Q52 190 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 PLCXD3Q63HM9 321 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 MOB3BQ86TA1 216 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 ANGPTL5Q86XS5 388 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 TMEM104Q8NE00 496 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 THEM6Q8WUY1 208 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 MS4A10Q96PG2 267 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 HIST1H2AAQ96QV6 131 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 PBOV1Q9GZY1 135 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 IL36RNQ9UBH0 155 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 NUFIP1Q9UHK0 495 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 V9GYS6 101 aa7.54□□□□□ -1.2
HDGFL3-204ENST00000563790 MPTX1A8MV57 137 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 J3QR06 171 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 DHRS3O75911 302 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 CCNB2O95067 398 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 IFNGP01579 166 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 ATP6V1B2P21281 511 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 RIPPLY1Q0D2K3 151 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 MICAQ29983 383 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 LCN1P1Q5VSP4 162 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 DEGS2Q6QHC5 323 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 YIPF7Q8N8F6 280 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 FAM81AQ8TBF8 368 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 HAVCR2Q8TDQ0 301 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 GALNT14Q96FL9 552 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 NSMCE2Q96MF7 247 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 PKIBQ9C010 78 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 OR51V1Q9H2C8 321 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 CNOT2Q9NZN8 540 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-204ENST00000563790 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 TMEM269A0A1B0GVZ9 245 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 A0A1W2PPQ1 181 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 CCDC182A6NF36 153 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 PRODHO43272 600 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 CCDC22O60826 627 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 FOLR2P14207 255 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 H2AFXP16104 143 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 FUT3P21217 361 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 GCSHP23434 173 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 CD1BP29016 333 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 PRDX6P30041 224 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 SAMD4BQ5PRF9 694 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 CLVS2Q5SYC1 327 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 ZNF684Q5T5D7 378 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 MCUR1Q96AQ8 359 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 SNX22Q96L94 193 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 TAS2R3Q9NYW6 316 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 ERGIC3Q9Y282 383 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 POLDIP2Q9Y2S7 368 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 TMED3Q9Y3Q3 217 aa7.52□□□□□ -1.21
HDGFL3-204ENST00000563790 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 C13orf42A0A1B0GVH6 325 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 A6NIN4 97 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 HSD17B6O14756 317 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 EREGO14944 169 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 TRBV12-3P01733 135 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 TRGV3P03979 118 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 CCL1P22362 96 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 OR3A1P47881 315 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 CDK5Q00535 292 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 NDPQ00604 133 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 ZNF91Q05481 1191 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 UBE2V2Q15819 145 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 LRRC36Q1X8D7 754 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 ASRGL1Q7L266 308 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 TMEM179BQ7Z7N9 219 aa7.51□□□□□ -1.21
HDGFL3-204ENST00000563790 CPOQ8IVL8 374 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms