RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TPRKBQ9Y3C4 175 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 AP4M1O00189 453 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 CFHR3Q02985 330 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 XAF1Q6GPH4 301 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 BPIFB6Q8NFQ5 453 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 OR52I1Q8NGK6 324 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 GGHQ92820 318 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 PRR25Q96S07 402 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 LIN7CQ9NUP9 197 aaKnown RBP13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
HDGFL3-203ENST00000563404 IGHV3-43A0A0B4J1X8 118 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 SLC31A2O15432 143 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 MAGEB3O15480 346 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 MRPS14O60783 128 aaKnown RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 OR7C1O76099 320 aaPredicted RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 IGHV3-43DP0DP04 118 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 GZMHP20718 246 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 GBX2P52951 348 aaPredicted RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 RBM11P57052 281 aaKnown RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 GPR50Q13585 617 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 KIR2DS1Q14954 304 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 TMEM80Q96HE8 168 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 GFOD1Q9NXC2 390 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 DIMT1Q9UNQ2 313 aaKnown RBP13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 RYR2Q92736 4967 aa13.15□□□□□ -0.3
HDGFL3-203ENST00000563404 A0A1W2PP11 408 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 TMEM30CPA0ZSE6 113 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 SDCBPO00560 298 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 RAMP3O60896 148 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 LIMS3P0CW19 117 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 LIMS4P0CW20 117 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 CRHBPP24387 322 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 CDX1P47902 265 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 ST3GAL4Q11206 333 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 FOXE3Q13461 319 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 C8orf31Q8N9H6 132 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 OR52M1Q8NGK5 317 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 OR8U1Q8NH10 309 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 ORAI1Q96D31 301 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 S1PR3Q99500 378 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 ZMAT5Q9UDW3 170 aaKnown RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 U3KQK5 164 aa13.14□□□□□ -0.31
HDGFL3-203ENST00000563404 STAB2Q8WWQ8 2551 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 MOSP00540 346 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 MT-ND4P03905 459 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 SERPINA2P20848 420 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 CD1BP29016 333 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 F2RL1P55085 397 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 GP2P55259 537 aaKnown RBP13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 SACSQ9NZJ4 4579 aa13.13□□□□□ -0.31
HDGFL3-203ENST00000563404 ORC5O43913 435 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 IGHG4P01861 327 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 CDK1P06493 297 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ELANEP08246 267 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ZNF93P35789 620 aaPredicted RBP13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ECI1P42126 302 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ZNF134P52741 427 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 FHL3Q13643 280 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ATAD3CQ5T2N8 411 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 DDI2Q5TDH0 399 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ZNF497Q6ZNH5 498 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 STX19Q8N4C7 294 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 ASCL2Q99929 193 aa13.12□□□□□ -0.31
HDGFL3-203ENST00000563404 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 CSTBP04080 98 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms