RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 TRAV39A0A0B4J263 110 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 CCRL2O00421 344 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 SDCBPO00560 298 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 BPNT1O95861 308 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 GAPDHP04406 335 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 CD24P25063 80 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 IL3RAP26951 378 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 CD83Q01151 205 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 DEFA6Q01524 100 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 INSL4Q14641 139 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 RBM48Q5RL73 367 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 FAM27D1Q5T7N8 215 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 SYT6Q5T7P8 510 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 SLC25A48Q6ZT89 311 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 CEACAM19Q7Z692 300 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 IZUMO1Q8IYV9 350 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 KCNG3Q8TAE7 436 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 SGCDQ92629 289 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 LEAP2Q969E1 77 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 ST6GALNAC6Q969X2 333 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 TM2D1Q9BX74 207 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 TRAPPC2LQ9UL33 140 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 BLOC1S6Q9UL45 172 aa9.74□□□□□ -0.85
NSMCE1-204ENST00000563273 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 TMEM14DPA8MWL7 114 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 HSD17B6O14756 317 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 TXNL1O43396 289 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 KCNAB3O43448 404 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 SNRNP70P08621 437 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 VSIG8P0DPA2 414 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 CD28P10747 220 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 CPEP16870 476 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 CHATP28329 748 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 GNG10P50151 68 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 RPS27AP62979 156 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 QRFPP83859 136 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 TBCEQ15813 527 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 LTC4SQ16873 150 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 ABCA11PQ4W5N1 156 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 PDLIM3Q53GG5 364 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 FBLN7Q53RD9 439 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 LY6G6FQ5SQ64 297 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 LIPKQ5VXJ0 399 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 IZUMO2Q6UXV1 221 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 TMEM91Q6ZNR0 172 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 DRAM1Q8N682 238 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 ZNF439Q8NDP4 499 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 OR4F17Q8NGA8 305 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 OR6M1Q8NGM8 313 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 OR56B4Q8NH76 319 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 FAM110DQ8TAY7 271 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 CCDC107Q8WV48 283 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 OR4F4Q96R69 305 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 TMEM59Q9BXS4 323 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 RAB26Q9ULW5 256 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 LRRC42Q9Y546 428 aa9.73□□□□□ -0.85
NSMCE1-204ENST00000563273 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 MRPS14O60783 128 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 MPIG6BO95866 241 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 IGHV3-7P01780 117 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 HBZP02008 142 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 LPLP06858 475 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 TMEM11P17152 192 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 HTR2CP28335 458 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 CD1BP29016 333 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 HTD2P86397 168 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 DIAPH2-AS1Q14236 149 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 TMEM95Q3KNT9 176 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 OR2W3Q7Z3T1 314 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 OR5AU1Q8NGC0 362 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 OR4K15Q8NH41 348 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 MRPL30Q8TCC3 161 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 RTN4IP1Q8WWV3 396 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 NEDD4LQ96PU5 975 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 MGLLQ99685 303 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 KCNIP1Q9NZI2 227 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 JPT1Q9UK76 154 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
NSMCE1-204ENST00000563273 SLC17A2O00624 439 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 IGKV1D-33P01593 117 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 IGKV1-33P01594 117 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 RCC1P18754 421 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 PSMD7P51665 324 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 ZNF367Q7RTV3 350 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 CENPVQ7Z7K6 275 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 Q8N6K4 173 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 C5orf56Q8N8D9 126 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 OR8H1Q8NGG4 311 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 FAM46BQ96A09 425 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 ACOT13Q9NPJ3 140 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 GNG12Q9UBI6 72 aa9.71□□□□□ -0.86
NSMCE1-204ENST00000563273 KIAA2026Q5HYC2 2103 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms