RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PARD6GQ9BYG4 376 aaPredicted RBP11.15□□□□□ -0.62
USB1-207ENST00000563149 STRADBQ9C0K7 418 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 ERRFI1Q9UJM3 462 aaPredicted RBP11.15□□□□□ -0.62
USB1-207ENST00000563149 TGOLN2O43493 480 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 LAMTOR5O43504 91 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 NGFP01138 241 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 OR2B8PP59922 312 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 RUNX1Q01196 453 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 SRYQ05066 204 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
USB1-207ENST00000563149 SLC25A24Q6NUK1 477 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 SPRY4Q9C004 299 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 PRO3102Q9H379 93 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
USB1-207ENST00000563149 CISD1Q9NZ45 108 aaKnown RBP11.14□□□□□ -0.63
USB1-207ENST00000563149 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 ZNF503-AS2A6NEH8 195 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 J3QT63 122 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 J3QW42 95 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 HSPB6O14558 160 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 TNFSF12O43508 249 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 SYNGR2O43760 224 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 PSG2P11465 335 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 RPS10P46783 165 aaKnown RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 GLIPR1P48060 266 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 FOXG1P55316 489 aaPredicted RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 SERF2P84101 59 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 ELOBQ15370 118 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 C20orf204Q6ZNR8 217 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 Q8IYB0 196 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 RNASE11Q8TAA1 199 aaKnown RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 GPHA2Q96T91 129 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 P2RX4Q99571 388 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 KMT2EQ8IZD2 1858 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 HS3ST1O14792 307 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 CLN5O75503 358 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 Q6P435 159 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 ZNF295-AS1Q8N0V1 137 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 RDH5Q92781 318 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 LIN7CQ9NUP9 197 aaKnown RBP11.13□□□□□ -0.63
USB1-207ENST00000563149 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
USB1-207ENST00000563149 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 H0YL77 283 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 PPIHO43447 177 aaKnown RBP11.12□□□□□ -0.63
USB1-207ENST00000563149 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
USB1-207ENST00000563149 HBG1P69891 147 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 HBG2P69892 147 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 CDCP2Q5VXM1 449 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
USB1-207ENST00000563149 GPR87Q9BY21 358 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 PSENENQ9NZ42 101 aa11.12□□□□□ -0.63
USB1-207ENST00000563149 F10P00742 488 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 CELA3AP09093 270 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 WNT5AP41221 380 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 MAGEA5P43359 124 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 CLN3Q13286 438 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 OR1C1Q15619 314 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 DBX2Q6ZNG2 339 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 Q8WTZ3 238 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF488Q96MN9 340 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 RTL8AQ9BWD3 113 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 LAMA1P25391 3075 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 SDK2Q58EX2 2172 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 RNF212BA8MTL3 300 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 C21orf140B9A014 251 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
USB1-207ENST00000563149 NXPH3O95157 252 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 IGKV1-39P01597 117 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 IGKV1D-39P04432 117 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 BCL2P10415 239 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 CEBPGP53567 150 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 ZNF610Q8N9Z0 462 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 OR1K1Q8NGR3 316 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 GP6Q9HCN6 339 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 POLDIP2Q9Y2S7 368 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 WIPI2Q9Y4P8 454 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms