RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NRIP2Q9BQI9 281 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TMEM246Q9BRR3 403 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PKIBQ9C010 78 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 COMMD4Q9H0A8 199 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ZNF665Q9H7R5 613 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 FN3KRPQ9HA64 309 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PATZ1Q9HBE1 687 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 NDUFB11Q9NX14 153 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 CHCHD3Q9NX63 227 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 MTCH1Q9NZJ7 389 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4Q9UBX2 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 BLOC1S6Q9UL45 172 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 NOP16Q9Y3C1 178 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 PPIAL4AQ9Y536 164 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 MED13LQ71F56 2210 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 IGKV1D-17A0A075B6S4 117 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 IGHV3OR15-7A0A075B7D8 119 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 PNMA8CA0A1B0GUJ8 204 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 A0A1W2PPH5 198 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 FAM230AA0A1W2PPH8 454 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 A0A1W2PPK0 400 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 OOEPA6NGQ2 149 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 ANXA2P2A6NMY6 339 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 CEACAM18A8MTB9 384 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 TRAPPC2LH3BP13 241 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 LGALS8O00214 317 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 GABRPO00591 440 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 PPIHO43447 177 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 AKR7A2O43488 359 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 CD5LO43866 347 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 GATBO75879 557 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 LY6G6DO95868 133 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 SFTPBP07988 381 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 OCM2P0CE71 109 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 GABRA5P31644 462 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 MDH2P40926 338 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 HAAOP46952 286 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 NPBWR2P48146 333 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 RBP2P50120 134 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 FABP5Q01469 135 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 MZT1Q08AG7 82 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 PDZK1IP1Q13113 114 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 CARTPTQ16568 116 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 ACSM3Q53FZ2 586 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 ARMCX4Q5H9R4 360 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 FAM166AQ6J272 317 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 ACP7Q6ZNF0 438 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 FGFRL1Q8N441 504 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 MS4A15Q8N5U1 240 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 CD177Q8N6Q3 437 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 ANGPTL6Q8NI99 470 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 TRMT10AQ8TBZ6 339 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 NPRL2Q8WTW4 380 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 UFD1Q92890 307 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 RAB1CQ92928 201 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 C12orf43Q96C57 262 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 GAFA1Q96PS6 74 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 SPACA5Q96QH8 159 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 NKX3-1Q99801 234 aaPredicted RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 CCDC90BQ9GZT6 254 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 PLEKHA1Q9HB21 404 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 KAAG1Q9UBP8 84 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 FOXJ3Q9UPW0 622 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 MRPS28Q9Y2Q9 187 aaKnown RBP3.69□□□□□ -1.82
SMG1-206ENST00000562668 MAB21L2Q9Y586 359 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 F8P00451 2351 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 DSCAML1Q8TD84 2053 aa3.69□□□□□ -1.82
SMG1-206ENST00000562668 NSD1Q96L73 2696 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 MALRD1Q5VYJ5 2156 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ARHGAP32A7KAX9 2087 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TRDV1A0A1B0GX56 115 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 LRRC30A6NM36 301 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CCRL2O00421 344 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SPRY1O43609 319 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 ANGPTL7O43827 346 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ZNF737O75373 536 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TNFAIP8O95379 198 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SERPINA3P01011 423 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 GYPAP02724 150 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TFAP2AP05549 437 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 HSMCR30P0CW71 290 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 PSG2P11465 335 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SELLP14151 372 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 MUC1P15941 1255 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 RAB3AP20336 220 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 BCL3P20749 454 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 GALP22466 123 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 PRKACBP22694 351 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CPT2P23786 658 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 EEF1B2P24534 225 aaKnown RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 FGF9P31371 208 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR3A4PP47883 348 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ALDH3B2P48448 385 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ATP1B3P54709 279 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 MTCP1P56278 107 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 DSCR10P59022 87 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 QRFPP83859 136 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 KISS1Q15726 138 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms