RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MRPS17Q9Y2R5 130 aaKnown RBP11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 HS3ST1O14792 307 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 P04436 131 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 SPINK2P20155 84 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 DDTP30046 118 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 B3GALT5-AS1P59052 145 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF124Q15973 351 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 MRPL21Q7Z2W9 205 aaKnown RBP11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 GGNQ86UU5 652 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 KCNE4Q8WWG9 221 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 IL1F10Q8WWZ1 152 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 SPSB4Q96A44 273 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 PLK3Q9H4B4 646 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 MTCH1Q9NZJ7 389 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 CACNG5Q9UF02 275 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 ERRFI1Q9UJM3 462 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A087X0M5 115 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1B0GV90 55 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1B0GX30 115 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 OPN1MWP04001 364 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 SRD5A2P31213 254 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 Q8NFD4 153 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 RDH5Q92781 318 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 PRDM14Q9GZV8 571 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 KIAA1549Q9HCM3 1950 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CD300LBA8K4G0 201 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 C9J4A7 227 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CYC1P08574 325 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 MMP7P09237 267 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 IGFBP4P22692 258 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ELLP55199 621 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CLN3Q13286 438 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ADIRFQ15847 76 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 TRIM61Q5EBN2 209 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 WIPI1Q5MNZ9 446 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF295-AS1Q8N0V1 137 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CA5BP1Q8WTZ4 195 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 PSMF1Q92530 271 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 CLDN23Q96B33 292 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 FGF23Q9GZV9 251 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 SH2D2AQ9NP31 389 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 FSCN3Q9NQT6 498 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 OR2W1Q9Y3N9 320 aa11.93□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A096LPE4 126 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1W2PPZ6 126 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 SYNGR2O43760 224 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 SELLP14151 372 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF16P17020 682 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 TUBG1P23258 451 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 MLF1P58340 268 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 CD81P60033 236 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 Q6ZRM9 215 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 LY6G6EA0A0G2JKS1 128 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 IFNA1P01562 189 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 RFPL3SP0C7P2 107 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 MDH2P40926 338 aaKnown RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 ZFP36L1Q07352 338 aaKnown RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 ARL16Q0P5N6 197 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 NECAP1Q8NC96 275 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF845Q96IR2 970 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 HIST1H2AAQ96QV6 131 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 OR14J1Q9UGF5 321 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 GAB2Q9UQC2 676 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 U3KQA8 63 aa11.92□□□□□ -0.5
VPS9D1-202ENST00000561976 TRBV24-1A0A075B6N3 115 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 SYNGR1O43759 233 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 RNF224P0DH78 156 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 IL2RGP31785 369 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 HBG1P69891 147 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 HBG2P69892 147 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 HNF4GQ14541 408 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 CEACAM21Q3KPI0 293 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 UNQ6494/PRO21346Q6UXR6 183 aa11.91□□□□□ -0.5
VPS9D1-202ENST00000561976 MRGPRGQ86SM5 289 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms