RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 A8MXK9 166 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 IDSB3KWA1 339 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF878C9JN71 531 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 EI24O14681 340 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 PHF1O43189 567 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ERI3O43414 337 aaKnown RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 SOX15O60248 233 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 S1PR2O95136 353 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TBX6O95947 436 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 IFNA10P01566 189 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 COX6A1P12074 109 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 IL1RNP18510 177 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 HTR1DP28221 377 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 FCGR2CP31995 323 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 RCVRNP35243 200 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 HRH1P35367 487 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 KIR2DS4P43632 304 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CCR6P51684 374 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 DLX6P56179 175 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 RAB8AP61006 207 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 RAB2AP61019 212 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 STXBP1P61764 594 aaKnown RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 NUTF2P61970 127 aaKnown RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ELF3P78545 371 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 DEFA6Q01524 100 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CAV1Q03135 178 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 FAM53BQ14153 422 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ATP6AP1Q15904 470 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 HIST3H3Q16695 136 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 PRR30Q53SZ7 412 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM97Q5BJF2 176 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 DCST2Q5T1A1 773 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CPTPQ5TA50 214 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 FAAP20Q6NZ36 180 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM205Q6UW68 189 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CASP12Q6UXS9 341 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 GSG1LQ6UXU4 331 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TCF24Q7RTU0 167 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ANGPTL5Q86XS5 388 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OR4N5Q8IXE1 308 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OR2L13Q8N349 312 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 MMGT1Q8N4V1 131 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 GVQW1Q8N7I0 195 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF676Q8N7Q3 588 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 Q8NBF4 154 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 RELL2Q8NC24 303 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OR11G2Q8NGC1 345 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OR9A2Q8NGT5 310 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OR4K15Q8NH41 348 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 PYROXD1Q8WU10 500 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 L3HYPDHQ96EM0 354 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 IP6K3Q96PC2 410 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 NMNAT1Q9HAN9 279 aaPredicted RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 AMBNQ9NP70 447 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 BIN3Q9NQY0 253 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 C14orf105Q9NVL8 296 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 COA4Q9NYJ1 87 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 UTP11Q9Y3A2 253 aaKnown RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 MRPS18CQ9Y3D5 142 aaKnown RBP3.25□□□□□ -1.89
LRRC28-222ENST00000561431 HSPB11Q9Y547 144 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CSAG2Q9Y5P2 127 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 TNRC6AQ8NDV7 1962 aaKnown RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 IGHV1-45A0A0A0MS14 117 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF860A6NHJ4 632 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 MRPS12O15235 138 aaKnown RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 DLEU1O43261 78 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 PLIN3O60664 434 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 GALR3O60755 368 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 UGT2B11O75310 529 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 RDH16O75452 317 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 EIF3GO75821 320 aaKnown RBP eCLIP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 SLC22A5O76082 557 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 GAS8-AS1O95177 125 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 RBP1P09455 135 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 OR10J4P0C629 311 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 IFI30P13284 250 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 ATP5A1P25705 553 aaKnown RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 SPRP35270 261 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 AQP5P55064 265 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF121P58317 390 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 TAS2R41P59536 307 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 RIGQ13278 110 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 EDDM3AQ14507 147 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 LAGE3Q14657 143 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 GUSBP1Q15486 140 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 IGFBP7Q16270 282 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 PRSS8Q16651 343 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 LIN52Q52LA3 116 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 SYT6Q5T7P8 510 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-222ENST00000561431 HIST2H3PS2Q5TEC6 136 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 TRIM40Q6P9F5 258 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 IGFL2Q6UWQ7 119 aa3.24□□□□□ -1.89
LRRC28-222ENST00000561431 IGFL3Q6UXB1 125 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms