RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TMEM203Q969S6 136 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 RPEQ96AT9 228 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 CYYR1Q96J86 154 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 GFI1Q99684 422 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 TM2D1Q9BX74 207 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 ETAA1Q9NY74 926 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 TMEM14DPA8MWL7 114 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 C12orf77C9JDV5 145 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 PDCD6O75340 191 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 MAP2K4P45985 399 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 RAB7AP51149 207 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 RPS25P62851 125 aaKnown RBP16.49■□□□□ 0.23
TPM1-232ENST00000561425 RPS27AP62979 156 aaKnown RBP16.49■□□□□ 0.23
TPM1-232ENST00000561425 TBCEQ15813 527 aaPredicted RBP16.49■□□□□ 0.23
TPM1-232ENST00000561425 TMEM30BQ3MIR4 351 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 ZNF554Q86TJ5 538 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 OR8H3Q8N146 312 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 ZNF439Q8NDP4 499 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 NEK7Q8TDX7 302 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 ST6GALNAC6Q969X2 333 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 AKR1E2Q96JD6 320 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 SLC25A33Q9BSK2 321 aa16.49■□□□□ 0.23
TPM1-232ENST00000561425 A0A087WXM4 84 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 SDCBPO00560 298 aaPredicted RBP16.48■□□□□ 0.23
TPM1-232ENST00000561425 TSPAN15O95858 294 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 FAM106CPP0CH98 169 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 HSMCR30P0CW71 290 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 VSIG10L2P0DP72 767 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 CHATP28329 748 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 HTR2CP28335 458 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 GNG10P50151 68 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 ZNF816Q0VGE8 651 aaPredicted RBP16.48■□□□□ 0.23
TPM1-232ENST00000561425 UNC119Q13432 240 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 EBI3Q14213 229 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 C2orf68Q2NKX9 166 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 OR10K2Q6IF99 312 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 TRAT1Q6PIZ9 186 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 TSPAN14Q8NG11 270 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 OR6M1Q8NGM8 313 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 OR4K15Q8NH41 348 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 KCNG3Q8TAE7 436 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 TOMM40LQ969M1 308 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 FAM46BQ96A09 425 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 TRAPPC2LQ9UL33 140 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 WNK1Q9H4A3 2382 aa16.48■□□□□ 0.23
TPM1-232ENST00000561425 MPIG6BO95866 241 aa16.47■□□□□ 0.23
TPM1-232ENST00000561425 RCC1P18754 421 aaPredicted RBP16.47■□□□□ 0.23
TPM1-232ENST00000561425 FABP5Q01469 135 aa16.47■□□□□ 0.23
TPM1-232ENST00000561425 C6orf183Q5T699 404 aa16.47■□□□□ 0.23
TPM1-232ENST00000561425 FAM53AQ6NSI3 398 aaPredicted RBP16.47■□□□□ 0.23
TPM1-232ENST00000561425 SPARTQ8N0X7 666 aa16.47■□□□□ 0.23
TPM1-232ENST00000561425 MRPL30Q8TCC3 161 aaKnown RBP16.47■□□□□ 0.23
TPM1-232ENST00000561425 ACOT13Q9NPJ3 140 aa16.47■□□□□ 0.23
TPM1-232ENST00000561425 A0A1W2PPE3 182 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 SLC17A2O00624 439 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 ARL6IP5O75915 188 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 BPNT1O95861 308 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 ZNF137PP52743 207 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 SSX1Q16384 188 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 STEAP3Q658P3 488 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 ZNF367Q7RTV3 350 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 FAM89BQ8N5H3 189 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 DRAM1Q8N682 238 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 OR10X1Q8NGY0 326 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 UBALD1Q8TB05 177 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 SULT4A1Q9BR01 284 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 VCX3AQ9NNX9 186 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 RAB9BQ9NP90 201 aa16.46■□□□□ 0.23
TPM1-232ENST00000561425 UBE2QL1A1L167 161 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 M0QZK8 103 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 SPINT2O43291 252 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 HBZP02008 142 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 GAPDHP04406 335 aaKnown RBP16.45■□□□□ 0.22
TPM1-232ENST00000561425 SNRNP70P08621 437 aaKnown RBP16.45■□□□□ 0.22
TPM1-232ENST00000561425 CSF1P09603 554 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 ZNF134P52741 427 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 EMX1Q04741 257 aaPredicted RBP16.45■□□□□ 0.22
TPM1-232ENST00000561425 CD200R1LQ6Q8B3 271 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
TPM1-232ENST00000561425 OR2W3Q7Z3T1 314 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 OR56B4Q8NH76 319 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 CAPSLQ8WWF8 208 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 FCGR1BQ92637 280 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 TMEM59Q9BXS4 323 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 TAF9BQ9HBM6 251 aa16.45■□□□□ 0.22
TPM1-232ENST00000561425 A0A0A6YYD4 124 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 IGHV3-43A0A0B4J1X8 118 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 FOXI3A8MTJ6 420 aaPredicted RBP16.44■□□□□ 0.22
TPM1-232ENST00000561425 ADARB2-AS1A8MUL3 147 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 IGHV3-43DP0DP04 118 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 CD28P10747 220 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 VDAC2P45880 294 aaPredicted RBP16.44■□□□□ 0.22
TPM1-232ENST00000561425 CT45A1Q5HYN5 189 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 LY6G6FQ5SQ64 297 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 HIST2H2BDQ6DRA6 164 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 C11orf44Q8N8P7 122 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 OR1L1Q8NH94 360 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 CT45A3Q8NHU0 189 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 LPAR5Q9H1C0 372 aa16.44■□□□□ 0.22
TPM1-232ENST00000561425 AK6Q9Y3D8 172 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms