RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	GP2	P55259	537 aa	Known RBP	13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CD83	Q01151	205 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GPR50	Q13585	617 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	HNF4G	Q14541	408 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ACSM3	Q53FZ2	586 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SYT6	Q5T7P8	510 aa	Predicted RBP	13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	RNLS	Q5VYX0	342 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SIGIRR	Q6IA17	410 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	THNSL2	Q86YJ6	484 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	PRR18	Q8N4B5	295 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR52M1	Q8NGK5	317 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MYDGF	Q969H8	173 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	UQCC2	Q9BRT2	126 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	KCNK15	Q9H427	330 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TRAPPC2L	Q9UL33	140 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IGHV3-72	A0A0B4J1Y9	119 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IGHV1-3	A0A0C4DH29	117 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	UBE2QL1	A1L167	161 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CCRL2	O00421	344 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SLC31A2	O15432	143 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SPHAR	Q15513	63 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MED22	Q15528	200 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	KHDC1L	Q5JSQ8	128 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	C5orf56	Q8N8D9	126 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR10V1	Q8NGI7	309 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR1L1	Q8NH94	360 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SCN3B	Q9NY72	215 aa		13.66	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A10P	A6NDY2	464 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A7P	A6NKC0	464 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A23P	A8MXZ1	464 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MPIG6B	O95866	241 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	HBZ	P02008	142 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	PRB2	P02812	416 aa	Predicted RBP	13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	RCC1	P18754	421 aa	Predicted RBP	13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SLC35A2	P78381	396 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IRF3	Q14653	427 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	NKAPL	Q5M9Q1	402 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	C6orf183	Q5T699	404 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR10K2	Q6IF99	312 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	UNQ9370/PRO34162	Q6UXP9	181 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MOB3B	Q86TA1	216 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	LRRTM1	Q86UE6	522 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GAPT	Q8N292	157 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MS4A15	Q8N5U1	240 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	LINC00311	Q8N616	119 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR4X2	Q8NGF9	303 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CST11	Q9H112	138 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GNG12	Q9UBI6	72 aa		13.65	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TCRBV4S1A1T	A0A5B7	111 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SPINT2	O43291	252 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PDCD6	O75340	191 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SC5D	O75845	299 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GAPDH	P04406	335 aa	Known RBP	13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PF4V1	P10720	104 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	FUT3	P21217	361 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	IL3RA	P26951	378 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	OXLD1	Q5BKU9	147 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	KPRP	Q5T749	579 aa	Predicted RBP	13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	LIPK	Q5VXJ0	399 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	IZUMO1	Q8IYV9	350 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	C8orf31	Q8N9H6	132 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ZNF439	Q8NDP4	499 aa		13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.64	□□□□□ -0.23
CDC42BPB-208	ENST00000561271		H0YHG0	523 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	VSIG8	P0DPA2	414 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	MYF6	P23409	242 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GNMT	Q14749	295 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	HSD17B12	Q53GQ0	312 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CEACAM19	Q7Z692	300 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	C5orf24	Q7Z6I8	188 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	MRPL30	Q8TCC3	161 aa	Known RBP	13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PHYHIP	Q92561	330 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	UFD1	Q92890	307 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TMEM203	Q969S6	136 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ST6GALNAC6	Q969X2	333 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RBMXL1	Q96E39	390 aa	Known RBP	13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	EAF1	Q96JC9	268 aa	Predicted RBP	13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	NOL4L	Q96MY1	436 aa	Predicted RBP	13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GHRL	Q9UBU3	117 aa		13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.63	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	DNAH3	Q8TD57	4116 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PSMB11	A5LHX3	300 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	FGF16	O43320	207 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CA11	O75493	328 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	UBB	P0CG47	229 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	HSMCR30	P0CW71	290 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RPS25	P62851	125 aa	Known RBP	13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GLT8D1	Q68CQ7	371 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TRAT1	Q6PIZ9	186 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SLC25A48	Q6ZT89	311 aa	Known RBP	13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ZNF329	Q86UD4	541 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SULT4A1	Q9BR01	284 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	NICN1	Q9BSH3	213 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TMEM59	Q9BXS4	323 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ANKRD60	Q9BZ19	345 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TAF9B	Q9HBM6	251 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RAB9B	Q9NP90	201 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	LINC00527	Q9UJ94	153 aa		13.62	□□□□□ -0.23

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