RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LYL1P12980 280 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 EGR1P18146 543 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 ANXA7P20073 488 aaKnown RBP5.69□□□□□ -1.5
SPG11-224ENST00000561268 CCL1P22362 96 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 PRTN3P24158 256 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 ACKR3P25106 362 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 PRKXP51817 358 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 BPIFB3P59826 476 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 GNB2P62879 340 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 QRFPP83859 136 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 HOXA4Q00056 320 aaPredicted RBP5.69□□□□□ -1.5
SPG11-224ENST00000561268 EIF2B1Q14232 305 aaKnown RBP5.69□□□□□ -1.5
SPG11-224ENST00000561268 GFOD2Q3B7J2 385 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 ZNF260Q3ZCT1 412 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 AWAT1Q58HT5 328 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 FAM76BQ5HYJ3 339 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 STUMQ69YW2 141 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 ZNF660Q6AZW8 331 aaPredicted RBP5.69□□□□□ -1.5
SPG11-224ENST00000561268 C11orf87Q6NUJ2 197 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 WDR82Q6UXN9 313 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 LYG2Q86SG7 212 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 ZNF546Q86UE3 836 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 BCL6BQ8N143 479 aaPredicted RBP5.69□□□□□ -1.5
SPG11-224ENST00000561268 BPIFB2Q8N4F0 458 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 SIGLECL1Q8N7X8 197 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 CSNK2A3Q8NEV1 391 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 OR51S1Q8NGJ8 323 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 OR11L1Q8NGX0 322 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 OR1S1Q8NH92 325 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 C8orf46Q8TAG6 207 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 HPSE2Q8WWQ2 592 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 FAM46BQ96A09 425 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 REEP6Q96HR9 211 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 TBX15Q96SF7 602 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 PHB2Q99623 299 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 SEC22CQ9BRL7 303 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 MFFQ9GZY8 342 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 SIRPDQ9H106 197 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 CLN8Q9UBY8 286 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 OR52A1Q9UKL2 312 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 RHBDD3Q9Y3P4 386 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 LRP12Q9Y561 859 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 POMT1Q9Y6A1 747 aa5.69□□□□□ -1.5
SPG11-224ENST00000561268 TRAV38-1A0A0B4J264 116 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 IGHV3-64DA0A0J9YX35 117 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TEX13DA0A0J9YY54 714 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 OR5H14A6NHG9 310 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TMEM210A6NLX4 147 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TMEM14DPA8MWL7 114 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 F8VVB4 439 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 F8VWA3 439 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 RAB27BO00194 218 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TAAR5O14804 337 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 FGF16O43320 207 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ZNF205O95201 554 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 CST4P01036 141 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 RLN1P04808 185 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 FCER2P06734 321 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 PET100P0DJ07 73 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 IRF2P14316 349 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 MUC1P15941 1255 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 AMY2BP19961 511 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ZBTB25P24278 435 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 FPR2P25090 351 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 PAX6P26367 422 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 BDKRB2P30411 391 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 RPL15P61313 204 aaKnown RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 DHRS2Q13268 280 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TMEM128Q5BJH2 165 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 RNASE10Q5GAN6 216 aaKnown RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 LY6G6FQ5SQ64 297 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ATPAF1Q5TC12 328 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 ASPHD2Q6ICH7 369 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 EIF5AL1Q6IS14 154 aaKnown RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 BTNL3Q6UXE8 466 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 C12orf54Q6X4T0 127 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ZNF826PQ6ZT77 177 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 LDLRAD3Q86YD5 345 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 PXT1Q8NFP0 134 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 OR1M1Q8NGA1 313 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 OR8B12Q8NGG6 310 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 OR10Z1Q8NGY1 313 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 KCNG3Q8TAE7 436 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ST8SIA2Q92186 375 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 SGK3Q96BR1 496 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 SAT2Q96F10 170 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 CPNE2Q96FN4 548 aaPredicted RBP5.68□□□□□ -1.5
SPG11-224ENST00000561268 LYZL4Q96KX0 146 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 OCSTAMPQ9BR26 566 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 ATG5Q9H1Y0 275 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 RAB18Q9NP72 206 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 UFSP2Q9NUQ7 469 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 FAM206AQ9NX38 181 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 DNAJB11Q9UBS4 358 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 SLC22A13Q9Y226 551 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 MPC1Q9Y5U8 109 aa5.68□□□□□ -1.5
SPG11-224ENST00000561268 TET2Q6N021 2002 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms