RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 RCC2Q9P258 522 aaKnown RBP12.78□□□□□ -0.36
LMX1B-204ENST00000561065 BUB1B-PAK6H3BSN5 160 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 FBXO24O75426 580 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 MPIG6BO95866 241 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 MT-ND4P03905 459 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 ARSBP15848 533 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 MADCAM1Q13477 382 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 Q3ZCU0 254 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 ZNF554Q86TJ5 538 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 OR10X1Q8NGY0 326 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 RPEQ96AT9 228 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 Q96M66 194 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 PRSS22Q9GZN4 317 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 MMP28Q9H239 520 aa12.77□□□□□ -0.37
LMX1B-204ENST00000561065 RRP15Q9Y3B9 282 aaKnown RBP12.77□□□□□ -0.37
LMX1B-204ENST00000561065 G3V4G9 280 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 J3QR06 171 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 PDCD6O75340 191 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 PEX14O75381 377 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 OPN1MWP04001 364 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 FAM106CPP0CH98 169 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 MYL9P24844 172 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 IL3RAP26951 378 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
LMX1B-204ENST00000561065 MAP2K4P45985 399 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
LMX1B-204ENST00000561065 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
LMX1B-204ENST00000561065 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 LYPD6Q86Y78 171 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 LEAP2Q969E1 77 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 OCSTAMPQ9BR26 566 aa12.76□□□□□ -0.37
LMX1B-204ENST00000561065 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
LMX1B-204ENST00000561065 TRAV39A0A0B4J263 110 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 A0A1W2PP11 408 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 M0QZK8 103 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 CCRL2O00421 344 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 SLC17A2O00624 439 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 SLC22A1O15245 554 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 CD37P11049 281 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 SSTR5P35346 364 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 RAB7AP51149 207 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 INSL4Q14641 139 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 RAB11BQ15907 218 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 FAM27D1Q5T7N8 215 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 SYT6Q5T7P8 510 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-204ENST00000561065 TMEM91Q6ZNR0 172 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 TMEM104Q8NE00 496 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 CCDC107Q8WV48 283 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 CITED2Q99967 270 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-204ENST00000561065 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 V9GY05 133 aa12.75□□□□□ -0.37
LMX1B-204ENST00000561065 TRAV1-2A0A0B4J238 106 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 SH2D7A6NKC9 451 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-204ENST00000561065 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-204ENST00000561065 AMY1AP04745 511 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 AMY2AP04746 511 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 VDAC2P45880 294 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-204ENST00000561065 RPS25P62851 125 aaKnown RBP12.74□□□□□ -0.37
LMX1B-204ENST00000561065 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
LMX1B-204ENST00000561065 LTC4SQ16873 150 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 NSUN5P1Q3KNT7 163 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 STEAP3Q658P3 488 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 OR8H3Q8N146 312 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 C8orf31Q8N9H6 132 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 TOMM40LQ969M1 308 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 CYYR1Q96J86 154 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 SLC25A33Q9BSK2 321 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 MGAT4AQ9UM21 535 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 PSG11Q9UQ72 335 aa12.74□□□□□ -0.37
LMX1B-204ENST00000561065 TRDV1A0A1B0GX56 115 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 RGS11O94810 467 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
LMX1B-204ENST00000561065 GP2P55259 537 aaKnown RBP12.73□□□□□ -0.37
LMX1B-204ENST00000561065 FABP5Q01469 135 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 DIAPH2-AS1Q14236 149 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 BEAN1Q3B7T3 259 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 NKAPLQ5M9Q1 402 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 SAMD5Q5TGI4 173 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 UBE2UQ5VVX9 321 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 SPARTQ8N0X7 666 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
LMX1B-204ENST00000561065 AK6Q9Y3D8 172 aaKnown RBP12.73□□□□□ -0.37
LMX1B-204ENST00000561065 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 A0A1W2PPI3 338 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 UBE2QL1A1L167 161 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 OR2F2O95006 317 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 PSMB9P28065 219 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms