RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 OVOL2Q9BRP0 275 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 PBOV1Q9GZY1 135 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 ZCCHC4Q9H5U6 513 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 PLSCR3Q9NRY6 295 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 SCN3BQ9NY72 215 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 IDI2-AS1Q9NZ38 188 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 IL36RNQ9UBH0 155 aa7.24□□□□□ -1.25
HERC1-210ENST00000560897 RPL36Q9Y3U8 105 aaKnown RBP7.24□□□□□ -1.25
HERC1-210ENST00000560897 IRGMA1A4Y4 181 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 OR11H12B2RN74 326 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 PRKYO43930 277 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 CSTBP04080 98 aaKnown RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 ZNF44P15621 663 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 NPBWR2P48146 333 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 GTF2A1P52655 376 aaPredicted RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 F2RL1P55085 397 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 AQP4P55087 323 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 TMED1Q13445 227 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 ZNF146Q15072 292 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 MMDQ15546 238 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 TATDN3Q17R31 274 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 ZNF829Q3KNS6 432 aaPredicted RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 LINC01590Q5TEZ4 76 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 NXNL2Q5VZ03 156 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 C12orf73Q69YU5 71 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 PYHIN1Q6K0P9 492 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 LAX1Q8IWV1 398 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 YIPF7Q8N8F6 280 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 OTOSQ8NHW6 89 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 CNBD2Q96M20 576 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 MNTQ99583 582 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 TEAD3Q99594 435 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 ZNF184Q99676 751 aaPredicted RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 NMNAT2Q9BZQ4 307 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 MED20Q9H944 212 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 RANGRFQ9HD47 186 aaPredicted RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 RBFOX1Q9NWB1 397 aaKnown RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 WARS2Q9UGM6 360 aaKnown RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 LAMP5Q9UJQ1 280 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 GTF2A1LQ9UNN4 478 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 FOXA2Q9Y261 457 aaPredicted RBP7.23□□□□□ -1.25
HERC1-210ENST00000560897 GSTK1Q9Y2Q3 226 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 TMEM14AQ9Y6G1 99 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 HSPG2P98160 4391 aa7.23□□□□□ -1.25
HERC1-210ENST00000560897 TRBV2A0A0J9YWF9 115 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 A0A1W2PPE3 182 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 A6NIN4 97 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 ENTPD6O75354 484 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 FADS2O95864 444 aaKnown RBP7.22□□□□□ -1.25
HERC1-210ENST00000560897 OR2H2O95918 312 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 SCGB1D2O95969 90 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 IL1AP01583 271 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 EPHA2P29317 976 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 C21orf33P30042 268 aaPredicted RBP7.22□□□□□ -1.25
HERC1-210ENST00000560897 TPPP2P59282 170 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 SNRPGP62308 76 aaKnown RBP7.22□□□□□ -1.25
HERC1-210ENST00000560897 SCN1BQ07699 218 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 ATXN7L3Q14CW9 347 aaPredicted RBP7.22□□□□□ -1.25
HERC1-210ENST00000560897 TM4SF20Q53R12 229 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 SLC16A12Q6ZSM3 486 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 RDH10Q8IZV5 341 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 TCTEX1D1Q8N7M0 179 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 OR2K2Q8NGT1 345 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 ABHD5Q8WTS1 349 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 CASTOR1Q8WTX7 329 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 BORCS8Q96FH0 119 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 RHOVQ96L33 236 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 GGTLC1Q9BX51 225 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 MROQ9BYG7 248 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 CST11Q9H112 138 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 FAM206AQ9NX38 181 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 PFDN2Q9UHV9 154 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 BLOC1S6Q9UL45 172 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 TPRKBQ9Y3C4 175 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 FBXO7Q9Y3I1 522 aa7.22□□□□□ -1.25
HERC1-210ENST00000560897 ZNF670-ZNF695F2Z2N8 137 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 MAGEB3O15480 346 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 TXNL1O43396 289 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 SELENOFO60613 162 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 GATBO75879 557 aaKnown RBP7.21□□□□□ -1.26
HERC1-210ENST00000560897 BPNT1O95861 308 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 IFNA4P05014 189 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 CSN2P05814 226 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 MRPL3P09001 348 aaKnown RBP7.21□□□□□ -1.26
HERC1-210ENST00000560897 CALCBP10092 127 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 CPEP16870 476 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 MYL12AP19105 171 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 BCL3P20749 454 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 BLVRBP30043 206 aaPredicted RBP7.21□□□□□ -1.26
HERC1-210ENST00000560897 HTR1FP30939 366 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 BMI1P35226 326 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 FUT6P51993 359 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 TCTAP57738 103 aa7.21□□□□□ -1.26
HERC1-210ENST00000560897 ADARB1P78563 741 aaKnown RBP7.21□□□□□ -1.26
HERC1-210ENST00000560897 EWSR1Q01844 656 aaKnown RBP eCLIP7.21□□□□□ -1.26
HERC1-210ENST00000560897 ZNF691Q5VV52 312 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms