RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MRPS28Q9Y2Q9 187 aaKnown RBP12.74□□□□□ -0.37
HERC1-207ENST00000560316 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 IGHV3-11P01762 117 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ATP6V1E1P36543 226 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ZNF134P52741 427 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 LSAMPQ13449 338 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ECSCRQ19T08 205 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 LPCAT4Q643R3 524 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ANKRD13BQ86YJ7 626 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ANKRD60Q9BZ19 345 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 ZNF446Q9NWS9 450 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
HERC1-207ENST00000560316 PCLOQ9Y6V0 5065 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 A0A1W2PN81 502 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 C12orf77C9JDV5 145 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 TXNL1O43396 289 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 FAM107AO95990 144 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 HLA-DRB1P01911 266 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 CHRNA7P36544 502 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 ACTBP60709 375 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 FBXO7Q9Y3I1 522 aa12.72□□□□□ -0.37
HERC1-207ENST00000560316 TMEM30CPA0ZSE6 113 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 AQP12BA6NM10 295 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.37
HERC1-207ENST00000560316 ZNF137PP52743 207 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 NDPQ00604 133 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 CT45A1Q5HYN5 189 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 AQP12AQ8IXF9 295 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 ZNF439Q8NDP4 499 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 PXT1Q8NFP0 134 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 CT45A3Q8NHU0 189 aa12.71□□□□□ -0.37
HERC1-207ENST00000560316 FLYWCH2Q96CP2 140 aaKnown RBP12.71□□□□□ -0.37
HERC1-207ENST00000560316 SULT1B1O43704 296 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 FKBP6O75344 327 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 HTR3BO95264 441 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 HTR1AP08908 422 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 RSU1Q15404 277 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 C19orf54Q5BKX5 351 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 FDX2Q6P4F2 183 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 SATL1Q86VE3 508 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 TNFAIP8L1Q8WVP5 186 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 LINC00476Q8WZB0 136 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 NRBF2Q96F24 287 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 FAM192AQ9GZU8 254 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
HERC1-207ENST00000560316 ARL2BPQ9Y2Y0 163 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
HERC1-207ENST00000560316 OR4C45A6NMZ5 311 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 GABRPO00591 440 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 NBR2O15453 112 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 ORC5O43913 435 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 DCTN3O75935 186 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 OR7C1O76099 320 aaPredicted RBP12.69□□□□□ -0.38
HERC1-207ENST00000560316 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 Q3ZCU0 254 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 NSL1Q96IY1 281 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 GPER1Q99527 375 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 GNG12Q9UBI6 72 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
HERC1-207ENST00000560316 SLC25A17O43808 307 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 LANCL1O43813 399 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 LY6G6CO95867 125 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 CCR9P51686 369 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 LRRC36Q1X8D7 754 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 SPATA24Q86W54 205 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 OR5D14Q8NGL3 314 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 MS4A10Q96PG2 267 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 ERGIC3Q9Y282 383 aa12.68□□□□□ -0.38
HERC1-207ENST00000560316 AIPO00170 330 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
HERC1-207ENST00000560316 CDRT1O95170 752 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 MT-ND4P03905 459 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
HERC1-207ENST00000560316 ATAD3CQ5T2N8 411 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 PRR18Q8N4B5 295 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 NEK7Q8TDX7 302 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
HERC1-207ENST00000560316 MRPL20Q9BYC9 149 aaKnown RBP12.67□□□□□ -0.38
HERC1-207ENST00000560316 CST11Q9H112 138 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
HERC1-207ENST00000560316 J3QLW9 94 aa12.66□□□□□ -0.38
HERC1-207ENST00000560316 SLC16A6O15403 523 aa12.66□□□□□ -0.38
HERC1-207ENST00000560316 ZNF19P17023 458 aa12.66□□□□□ -0.38
HERC1-207ENST00000560316 HOXB6P17509 224 aaKnown RBP12.66□□□□□ -0.38
HERC1-207ENST00000560316 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
HERC1-207ENST00000560316 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
HERC1-207ENST00000560316 TPPP2P59282 170 aa12.66□□□□□ -0.38
HERC1-207ENST00000560316 RAB40BQ12829 278 aa12.66□□□□□ -0.38
HERC1-207ENST00000560316 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms