RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SCOCQ9UIL1 159 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 CSTBP04080 98 aaKnown RBP10.23□□□□□ -0.77
TPM1-220ENST00000559556 IGF1P05019 195 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 LIMS3P0CW19 117 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 LIMS4P0CW20 117 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 SERPINA2P20848 420 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 SOX6P35712 828 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 GTF2A1P52655 376 aaPredicted RBP10.23□□□□□ -0.77
TPM1-220ENST00000559556 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 DDI2Q5TDH0 399 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
TPM1-220ENST00000559556 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 OR52I1Q8NGK6 324 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 RHOXF1Q8NHV9 184 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 UBALD1Q8TB05 177 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 GPR148Q8TDV2 347 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 Q96MT0 163 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 METTL9Q9H1A3 318 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 TMEM138Q9NPI0 162 aa10.23□□□□□ -0.77
TPM1-220ENST00000559556 MRPS18AQ9NVS2 196 aaKnown RBP10.23□□□□□ -0.77
TPM1-220ENST00000559556 PAK1IP1Q9NWT1 392 aaPredicted RBP10.23□□□□□ -0.77
TPM1-220ENST00000559556 ZNF736B4DX44 427 aaPredicted RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 C3orf84H3BNL1 204 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 H3BNX3 289 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 SLC31A2O15432 143 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 VDAC1P21796 283 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 CHATP28329 748 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 ZNF93P35789 620 aaPredicted RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 ECI1P42126 302 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 CCDC58Q4VC31 144 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 XAF1Q6GPH4 301 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 FAM53AQ6NSI3 398 aaPredicted RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 CBR4Q8N4T8 237 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 AMBNQ9NP70 447 aa10.22□□□□□ -0.77
TPM1-220ENST00000559556 RCC2Q9P258 522 aaKnown RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 RRP15Q9Y3B9 282 aaKnown RBP10.22□□□□□ -0.77
TPM1-220ENST00000559556 A0A1W2PP11 408 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 C12orf77C9JDV5 145 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 ANKRD65E5RJM6 399 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 AIPO00170 330 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 ZNF780AO75290 641 aaPredicted RBP10.21□□□□□ -0.77
TPM1-220ENST00000559556 MT-ND4P03905 459 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 OR5H8P0DN80 308 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 BDKRB2P30411 391 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 VHLP40337 213 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 F2RL1P55085 397 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 PPP3R1P63098 170 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 ATAD3CQ5T2N8 411 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 RPL22L1Q6P5R6 122 aaKnown RBP10.21□□□□□ -0.77
TPM1-220ENST00000559556 GAPTQ8N292 157 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 NEK7Q8TDX7 302 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 CCDC107Q8WV48 283 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 KCTD7Q96MP8 289 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 S100A13Q99584 98 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 CHCHD6Q9BRQ6 235 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 RAB9BQ9NP90 201 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 ING4Q9UNL4 249 aa10.21□□□□□ -0.77
TPM1-220ENST00000559556 I3L521 148 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 SPINT2O43291 252 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 GTF2F2P13984 249 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 IGFBP3P17936 291 aaPredicted RBP10.2□□□□□ -0.78
TPM1-220ENST00000559556 INSL3P51460 131 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 ZNF134P52741 427 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 RUNX1Q01196 453 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 LSAMPQ13449 338 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 ZNF260Q3ZCT1 412 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 SLC22A6Q4U2R8 563 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 CT45A1Q5HYN5 189 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 ASPHD1Q5U4P2 390 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 ZFP1Q6P2D0 407 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 STX19Q8N4C7 294 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 OR11H1Q8NG94 326 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 CT45A3Q8NHU0 189 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 APH1BQ8WW43 257 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 SMIM19Q96E16 107 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 ZNF184Q99676 751 aaPredicted RBP10.2□□□□□ -0.78
TPM1-220ENST00000559556 SPACA1Q9HBV2 294 aa10.2□□□□□ -0.78
TPM1-220ENST00000559556 FGF20Q9NP95 211 aaPredicted RBP10.2□□□□□ -0.78
TPM1-220ENST00000559556 ZNF107Q9UII5 783 aaPredicted RBP10.2□□□□□ -0.78
TPM1-220ENST00000559556 RPL36Q9Y3U8 105 aaKnown RBP10.2□□□□□ -0.78
TPM1-220ENST00000559556 LANCL1O43813 399 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 HBZP02008 142 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 OR8U8P0C7N1 319 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 SLC2A2P11168 524 aaPredicted RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 PPIFP30405 207 aaKnown RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 ZNF616Q08AN1 781 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 RIPK1Q13546 671 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 KIAA0141Q14154 515 aaPredicted RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 SYT6Q5T7P8 510 aaPredicted RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 STEAP3Q658P3 488 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 TRAT1Q6PIZ9 186 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 ZNF491Q8N8L2 437 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 ORAI1Q96D31 301 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms