RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CLVS1Q8IUQ0 354 aaPredicted RBP16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 DYNAPQ8N1N2 210 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 OR1L1Q8NH94 360 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 SLC25A46Q96AG3 418 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 TAF9BQ9HBM6 251 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 ZNRD1Q9P1U0 126 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 TBL2Q9Y4P3 447 aaKnown RBP16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 TRBV6-6A0A0A6YYG2 114 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 HBZP02008 142 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 GNB3P16520 340 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 IER3P46695 156 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 LOXL3P58215 753 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 TRAT1Q6PIZ9 186 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 BEND2Q8NDZ0 799 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 OR52M1Q8NGK5 317 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 OR4P4Q8NGL7 312 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 SLC25A38Q96DW6 304 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 MALSU1Q96EH3 234 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 RIMS4Q9H426 269 aaPredicted RBP16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 ZMAT3Q9HA38 289 aaKnown RBP16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 CHMP1AQ9HD42 196 aaPredicted RBP16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 RHBDL2Q9NX52 303 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 ABRACLQ9P1F3 81 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 SPATA2Q9UM82 520 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 PSG11Q9UQ72 335 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 ETV7Q9Y603 341 aa16.44■□□□□ 0.22
TSPAN3-207ENST00000559494 IGHV3-43A0A0B4J1X8 118 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 CLDN34H7C241 214 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 TRIM77I1YAP6 450 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 MFNGO00587 321 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 SPINT2O43291 252 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 IGHV4-59P01825 116 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 IGHV3-43DP0DP04 118 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 PRRX1P54821 245 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 MINOS1Q5TGZ0 78 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 ZNF554Q86TJ5 538 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 PRR18Q8N4B5 295 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 OR9G1Q8NH87 305 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 MDFIQ99750 246 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 CMSS1Q9BQ75 279 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 TNFRSF19Q9NS68 423 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 GFOD1Q9NXC2 390 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 KCNIP1Q9NZI2 227 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 MINOS1-NBL1R4GNA1 71 aa16.43■□□□□ 0.22
TSPAN3-207ENST00000559494 A0A075B6Q4 140 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 J3QR06 171 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 SDCBPO00560 298 aaPredicted RBP16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 TOR1AO14656 332 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 HTR1DP28221 377 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 HMGN3Q15651 99 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 CDNFQ49AH0 187 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 TMEM86BQ8N661 226 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 NDNFQ8TB73 568 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 SETD6Q8TBK2 473 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 ZNF596Q8TC21 504 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 SSMEM1Q8WWF3 244 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 DCSTAMPQ9H295 470 aa16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 ELF5Q9UKW6 265 aaPredicted RBP16.42■□□□□ 0.22
TSPAN3-207ENST00000559494 SSX2Q16385 188 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 HLA-DRB5Q30154 266 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 ZFAND2BQ8WV99 257 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 TMEM158Q8WZ71 300 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 SSX3Q99909 188 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 Q9N2K0 584 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 RAB9BQ9NP90 201 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 C12orf4Q9NQ89 552 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 DPM3Q9P2X0 92 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 HILPDAQ9Y5L2 63 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 POMT1Q9Y6A1 747 aa16.41■□□□□ 0.22
TSPAN3-207ENST00000559494 A0A1W2PPE3 182 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 LY6LH3BQJ8 138 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 BUB1B-PAK6H3BSN5 160 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 RNASE1P07998 156 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 CD3GP09693 182 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 GNG10P50151 68 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 OR52L2PQ8NGH6 319 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 FAM216AQ8WUB2 273 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 CHIAQ9BZP6 476 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 MMP28Q9H239 520 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 DPAGT1Q9H3H5 408 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 CEPT1Q9Y6K0 416 aa16.4■□□□□ 0.22
TSPAN3-207ENST00000559494 POM121CA8CG34 1229 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 RNF212BA8MTL3 300 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 SERPINE3A8MV23 424 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 RORCP51449 518 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 TMBIM6P55061 237 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 SPCS2Q15005 226 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 ZNF260Q3ZCT1 412 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 PLA1AQ53H76 456 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 C16orf87Q6PH81 154 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 MOB1BQ7L9L4 216 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 OR10V1Q8NGI7 309 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 PIFOQ8TCI5 191 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 KCTD12Q96CX2 325 aaKnown RBP16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 ABCG5Q9H222 651 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 OR2S2Q9NQN1 319 aa16.39■□□□□ 0.21
TSPAN3-207ENST00000559494 LEUTXA8MZ59 168 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms