RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZNF649Q9BS31 505 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 S100A14Q9HCY8 104 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 FAM118AQ9NWS6 357 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 TAS2R3Q9NYW6 316 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR6C3Q9NZP0 311 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 RPL36Q9Y3U8 105 aaKnown RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 NOTCH3Q9UM47 2321 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 IGHV3-72A0A0B4J1Y9 119 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 TRAV24A0A0B4J272 114 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 KBTBD11-OT1A0A1B0GTJ5 212 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 LOC100130705A0A1B0GUX0 176 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 FAM90A22PA8MWA6 464 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 OR2F2O95006 317 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 IGLV1-47P01700 117 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 MT-ND2P03891 347 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 CSTBP04080 98 aaKnown RBP5.82□□□□□ -1.48
SPG11-213ENST00000558988 LIMS3P0CW19 117 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 LIMS4P0CW20 117 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 TMEM11P17152 192 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 MYL12AP19105 171 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 SSTR5P35346 364 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 ETV1P50549 477 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 PPP3R1P63098 170 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 RAB40BQ12829 278 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 DIAPH2-AS1Q14236 149 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 SLC22A6Q4U2R8 563 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 CCDC144NLQ6NUI1 221 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 TMPRSS11AQ6ZMR5 421 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 ZNF329Q86UD4 541 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 PQLC1Q8N2U9 271 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 PARP16Q8N5Y8 322 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 ZNF565Q8N9K5 539 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 SUMF2Q8NBJ7 301 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 OR10X1Q8NGY0 326 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 OR9G1Q8NH87 305 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 RHOXF1Q8NHV9 184 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 GPR148Q8TDV2 347 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 APH1BQ8WW43 257 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 CORO2AQ92828 525 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 TMEM106AQ96A25 262 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 CREB3L1Q96BA8 519 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 RBM14Q96PK6 669 aaKnown RBP5.82□□□□□ -1.48
SPG11-213ENST00000558988 DPCDQ9BVM2 203 aaPredicted RBP5.82□□□□□ -1.48
SPG11-213ENST00000558988 BARHL1Q9BZE3 327 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 SEBOXQ9HB31 216 aaPredicted RBP5.82□□□□□ -1.48
SPG11-213ENST00000558988 INPP5EQ9NRR6 644 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 NECAP2Q9NVZ3 263 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 IDI2-AS1Q9NZ38 188 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 LINC00527Q9UJ94 153 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 ST3GAL6Q9Y274 331 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 MOB4Q9Y3A3 225 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 AMMECR1Q9Y4X0 333 aaPredicted RBP5.82□□□□□ -1.48
SPG11-213ENST00000558988 HSPE1-MOB4S4R3N1 261 aa5.82□□□□□ -1.48
SPG11-213ENST00000558988 IGHV3-43A0A0B4J1X8 118 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 A0A1W2PP11 408 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 A0A1W2PPK0 400 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 PSMB11A5LHX3 300 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 SERPINE3A8MV23 424 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 J3QR06 171 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 LY86O95711 162 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 IL1AP01583 271 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 IGKV1D-33P01593 117 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 IGKV1-33P01594 117 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 CSN2P05814 226 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 FAM106CPP0CH98 169 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 IGHV3-43DP0DP04 118 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 CD34P28906 385 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 C21orf33P30042 268 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 HOXD3P31249 432 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 ZNF93P35789 620 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 RAB25P57735 213 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 LOXL3P58215 753 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 MRPL28Q13084 256 aaKnown RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 MADCAM1Q13477 382 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 CT83Q5H943 113 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 DEFB121Q5J5C9 76 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 TCTEX1D4Q5JR98 221 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 KPRPQ5T749 579 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 RSBN1Q5VWQ0 802 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 FAM53AQ6NSI3 398 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 C16orf82Q7Z2V1 217 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 MOB3BQ86TA1 216 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 C10orf67Q8IYJ2 551 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 OSR2Q8N2R0 312 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 PRR18Q8N4B5 295 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 JAGN1Q8N5M9 183 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 OR51T1Q8NGJ9 327 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 OR52N1Q8NH53 320 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 RBMXL1Q96E39 390 aaKnown RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 NOL4LQ96MY1 436 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 ZNF184Q99676 751 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 METTL9Q9H1A3 318 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 RHOFQ9HBH0 211 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 SMPD3Q9NY59 655 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 CLEC2DQ9UHP7 191 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 ZNF580Q9UK33 172 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 PSG11Q9UQ72 335 aa5.81□□□□□ -1.48
SPG11-213ENST00000558988 TSSC4Q9Y5U2 329 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 SIRT4Q9Y6E7 314 aaPredicted RBP5.81□□□□□ -1.48
SPG11-213ENST00000558988 VWFP04275 2813 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms