RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
SMAD6-203ENST00000558937 SELENOIQ9C0D9 397 aa11.97□□□□□ -0.49
SMAD6-203ENST00000558937 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 SLC31A2O15432 143 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 CRTAPO75718 401 aaPredicted RBP11.96□□□□□ -0.49
SMAD6-203ENST00000558937 IGLL1P15814 213 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 IL3RAP26951 378 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 MAPK3P27361 379 aaPredicted RBP11.96□□□□□ -0.49
SMAD6-203ENST00000558937 EBI3Q14213 229 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 Q3ZCU0 254 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 C6orf183Q5T699 404 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 SYT6Q5T7P8 510 aaPredicted RBP11.96□□□□□ -0.49
SMAD6-203ENST00000558937 Q6ZPA2 131 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 IZUMO1Q8IYV9 350 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 GAPTQ8N292 157 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 SGCDQ92629 289 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 THRSPQ92748 146 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 Q96M66 194 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 ERGIC3Q9Y282 383 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 PEX16Q9Y5Y5 336 aa11.96□□□□□ -0.49
SMAD6-203ENST00000558937 CDK1P06493 297 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 VHLP40337 213 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 INSL4Q14641 139 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 Q8N6K4 173 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 ZNF439Q8NDP4 499 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 OR1L1Q8NH94 360 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 TFAP2CQ92754 450 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 ST6GALNAC6Q969X2 333 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 EAF1Q96JC9 268 aaPredicted RBP11.95□□□□□ -0.5
SMAD6-203ENST00000558937 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
SMAD6-203ENST00000558937 UQCC2Q9BRT2 126 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 VCXQ9H320 206 aa11.95□□□□□ -0.5
SMAD6-203ENST00000558937 AURKAIP1Q9NWT8 199 aaPredicted RBP11.95□□□□□ -0.5
SMAD6-203ENST00000558937 SERPINE3A8MV23 424 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 SPINT2O43291 252 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 SC5DO75845 299 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 HBZP02008 142 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 FUT3P21217 361 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-203ENST00000558937 TMEM30BQ3MIR4 351 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 FAM27D1Q5T7N8 215 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 FOXB2Q5VYV0 432 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 TRAT1Q6PIZ9 186 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 SLC25A48Q6ZT89 311 aaKnown RBP11.94□□□□□ -0.5
SMAD6-203ENST00000558937 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 OR10V1Q8NGI7 309 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 CHPT1Q8WUD6 406 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 RTN4IP1Q8WWV3 396 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-203ENST00000558937 FAM46BQ96A09 425 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 MND1Q9BWT6 205 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 RAB9BQ9NP90 201 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 GNG12Q9UBI6 72 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
SMAD6-203ENST00000558937 UBE2QL1A1L167 161 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 PDCD6O75340 191 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 CA11O75493 328 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 MPIG6BO95866 241 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 IGHG2P01859 326 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 GLAP06280 429 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
SMAD6-203ENST00000558937 ZNF137PP52743 207 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 GP2P55259 537 aaKnown RBP11.93□□□□□ -0.5
SMAD6-203ENST00000558937 SLC35A2P78381 396 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 GPR50Q13585 617 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 ACSM3Q53FZ2 586 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 C6orf141Q5SZD1 244 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 UNQ9370/PRO34162Q6UXP9 181 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 CST11Q9H112 138 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 GHRLQ9UBU3 117 aa11.93□□□□□ -0.5
SMAD6-203ENST00000558937 NKX1-2Q9UD57 310 aaPredicted RBP11.93□□□□□ -0.5
SMAD6-203ENST00000558937 LSM2Q9Y333 95 aaKnown RBP11.93□□□□□ -0.5
SMAD6-203ENST00000558937 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
SMAD6-203ENST00000558937 ZNF736B4DX44 427 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-203ENST00000558937 TXNL1O43396 289 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 CD1BP29016 333 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 ZNF134P52741 427 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 RPL23AP62750 156 aaKnown RBP11.92□□□□□ -0.5
SMAD6-203ENST00000558937 CT45A1Q5HYN5 189 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 NKAPLQ5M9Q1 402 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 RBM48Q5RL73 367 aaKnown RBP11.92□□□□□ -0.5
SMAD6-203ENST00000558937 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 C18orf65Q6ZTR6 163 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 TGIF2LXQ8IUE1 241 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 FOXRED2Q8IWF2 684 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 STPG2Q8N412 459 aa11.92□□□□□ -0.5
SMAD6-203ENST00000558937 MS4A15Q8N5U1 240 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms