RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 CD81P60033 236 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 RUNX1Q01196 453 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 PIGYQ3MUY2 71 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 OR8B3Q8NGG8 313 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 OR8B2Q96RD0 313 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 HIST1H4GQ99525 98 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
SPG11-210ENST00000558319 CTLA4P16410 223 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 OR13G1Q8NGZ3 307 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 LHX9Q9NQ69 397 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 ANXA10Q9UJ72 324 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 CES1P1Q9UKY3 287 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 A1L4Q6 167 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 TSPAN13O95857 204 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 SPOCK3Q9BQ16 436 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 TRDCB7Z8K6 153 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 MFAP2P55001 183 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 KLF9Q13886 244 aaPredicted RBP12.24□□□□□ -0.45
SPG11-210ENST00000558319 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 P2RX4Q99571 388 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 GPA33Q99795 319 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 PRDM14Q9GZV8 571 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 CTDSPLO15194 276 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 BMI1P35226 326 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 MDH2P40926 338 aaKnown RBP12.24□□□□□ -0.45
SPG11-210ENST00000558319 GFRA1P56159 465 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 ZNF79Q15937 498 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 LY6EQ16553 131 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 VSTM2LQ96N03 204 aa12.24□□□□□ -0.45
SPG11-210ENST00000558319 SAP30LQ9HAJ7 183 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 FOXJ2Q9P0K8 574 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 CXorf1O96002 111 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 PRR35P0CG20 571 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 PSG2P11465 335 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 OR8I2Q8N0Y5 310 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 HDHD3Q9BSH5 251 aaPredicted RBP12.23□□□□□ -0.45
SPG11-210ENST00000558319 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
SPG11-210ENST00000558319 DCAF12L2Q5VW00 463 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 PUSL1Q8N0Z8 303 aaKnown RBP12.23□□□□□ -0.45
SPG11-210ENST00000558319 hADV38S2A0JD32 116 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 HAND1O96004 215 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
SPG11-210ENST00000558319 TMEM50BP56557 158 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 MGAT2Q10469 447 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 OR51M1Q9H341 326 aa12.23□□□□□ -0.45
SPG11-210ENST00000558319 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 LINC01465Q8N7H1 131 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 RNF133Q8WVZ7 376 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 SLC25A33Q9BSK2 321 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 PLPP3O14495 311 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 CCL3P10147 92 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 EFNB2P52799 333 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 SLC23A3Q6PIS1 610 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 HIST1H1EP10412 219 aaKnown RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 LINC00518Q8N0U6 118 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 GRAMD2BQ96HH9 432 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 OPN3Q9H1Y3 402 aaPredicted RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 CXXC4Q9H2H0 198 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 OR5AC2Q9NZP5 309 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 ZNF506Q5JVG8 444 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 DMKNQ6E0U4 476 aaPredicted RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 ZNF764Q96H86 408 aaPredicted RBP12.22□□□□□ -0.45
SPG11-210ENST00000558319 GNG7O60262 68 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 ZNF273Q14593 569 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
SPG11-210ENST00000558319 ERASQ7Z444 233 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 OR4S2Q8NH73 311 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 RARRES2Q99969 163 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 CCL8P80075 99 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
SPG11-210ENST00000558319 ELF5Q9UKW6 265 aaPredicted RBP12.21□□□□□ -0.45
SPG11-210ENST00000558319 NDUFB4O95168 129 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 HOXA6P31267 233 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 GLRX2Q9NS18 164 aa12.21□□□□□ -0.45
SPG11-210ENST00000558319 IGKV3-20P01619 116 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 IL11P20809 199 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 ZFP64Q9NPA5 681 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 TRBV5-4A0A0C4DH59 114 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 C1QL1O75973 258 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 PPYP01298 95 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 PMELP40967 661 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 PRSS8Q16651 343 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 OVCH2Q7RTZ1 564 aa12.21□□□□□ -0.46
SPG11-210ENST00000558319 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 IGLV3-25P01717 112 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 ZNF707Q96C28 371 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 TNFSF18Q9UNG2 199 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 CYB5R3P00387 301 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms