RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 APOL3O95236 402 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CNIH1O95406 144 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CST1P01037 141 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 IGKV1D-12P01611 117 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 MT-ND2P03891 347 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CSTBP04080 98 aaKnown RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 OR2T7P0C7T2 308 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 UBCP0CG48 685 aaKnown RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 SLC2A2P11168 524 aaPredicted RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 ANXA8P13928 327 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ZP3P21754 424 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 PAX5Q02548 391 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CDK5R1Q15078 307 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 MMDQ15546 238 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 TATDN3Q17R31 274 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 Q3ZCU0 254 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 TMEM236Q5W0B7 351 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 PYHIN1Q6K0P9 492 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 LIN54Q6MZP7 749 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ZDHHC13Q8IUH4 622 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 TCTEX1D1Q8N7M0 179 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 TMEM104Q8NE00 496 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CNIH3Q8TBE1 160 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ARL11Q969Q4 196 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 RFT1Q96AA3 541 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ADAT3Q96EY9 351 aaPredicted RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 NR1H4Q96RI1 486 aaPredicted RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 MBOAT4Q96T53 435 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ZNF251Q9BRH9 671 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 ST6GALNAC5Q9BVH7 336 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 PRRG3Q9BZD7 231 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CST11Q9H112 138 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 HIPK2Q9H2X6 1198 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 SLC25A19Q9HC21 320 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 RANGRFQ9HD47 186 aaPredicted RBP3.97□□□□□ -1.77
SPG11-208ENST00000558155 PARP11Q9NR21 331 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 GFOD1Q9NXC2 390 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 RNF150Q9ULK6 438 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 CEPT1Q9Y6K0 416 aa3.97□□□□□ -1.77
SPG11-208ENST00000558155 HUWE1Q7Z6Z7 4374 aaKnown RBP3.96□□□□□ -1.77
SPG11-208ENST00000558155 DNAH7Q8WXX0 4024 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 IGHV7-81A0A0B4J1V7 117 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 TRAV24A0A0B4J272 114 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 A0A1W2PN81 502 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 SHISA3A0PJX4 238 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ATP6V0E1O15342 81 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ORC5O43913 435 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 RGS11O94810 467 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 FAM107AO95990 144 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 IGHV3-11P01762 117 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 HLA-DRB1P01911 266 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 RAP2AP10114 183 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ATP6V1B2P21281 511 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 BLVRBP30043 206 aaPredicted RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 SSTR5P35346 364 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 CHRNA7P36544 502 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 VHLP40337 213 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 CRISP1P54107 249 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 IL13RA2Q14627 380 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 RSBN1Q5VWQ0 802 aaPredicted RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 STEAP3Q658P3 488 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ZNF660Q6AZW8 331 aaPredicted RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 ELP2Q6IA86 826 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 SLC25A48Q6ZT89 311 aaKnown RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 FAM220AQ7Z4H9 259 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 HAPLN4Q86UW8 402 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 DHFR2Q86XF0 187 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 DEFB107AQ8IZN7 70 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 PRSS35Q8N3Z0 413 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 OR5D18Q8NGL1 313 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 GATAD1Q8WUU5 269 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 UTP4Q969X6 686 aaKnown RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 RHOVQ96L33 236 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 SPACA5Q96QH8 159 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 FAM110AQ9BQ89 295 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ANKRD60Q9BZ19 345 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 ADGRL4Q9HBW9 690 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 RETNQ9HD89 108 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 RAB9BQ9NP90 201 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 FRRS1LQ9P0K9 344 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 KIAA1456Q9P272 454 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 FOXA2Q9Y261 457 aaPredicted RBP3.96□□□□□ -1.78
SPG11-208ENST00000558155 MYRFQ9Y2G1 1151 aa3.96□□□□□ -1.78
SPG11-208ENST00000558155 SACSQ9NZJ4 4579 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TRAV39A0A0B4J263 110 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 LOC107986453A0A1B0GWG9 222 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 A0A1W2PQL4 384 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 TCRBV5S2A0A599 114 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 CXorf65A6NEN9 183 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 NUPR2A6NF83 97 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 C15orf65H3BRN8 121 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 NBR2O15453 112 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 SPINT2O43291 252 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 LANCL1O43813 399 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 PRKYO43930 277 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms