RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 KMT2BQ9UMN6 2715 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 RAI1Q7Z5J4 1906 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 CRYBG3Q68DQ2 2970 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ODAMA1E959 279 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 HSPA12AO43301 675 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 TUSC2O75896 110 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 DIRAS3O95661 229 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 CTSDP07339 412 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 RPS2P15880 293 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 CD34P28906 385 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ECI1P42126 302 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 PPOXP50336 477 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 PIGPP57054 158 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ZFP69Q49AA0 526 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 C11orf71Q6IPW1 123 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 TCTE3Q8IZS6 198 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ZNF436Q9C0F3 470 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ZNF665Q9H7R5 613 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 TRAV38-1A0A0B4J264 116 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 POM121CA8CG34 1229 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 HBZP02008 142 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 ANXA3P12429 323 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 H2BFSP57053 126 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 DHODHQ02127 395 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 HFEQ30201 348 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 PPP1R35Q8TAP8 253 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 ZFAND1Q8TCF1 268 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 GPHA2Q96T91 129 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 MGAT4AQ9UM21 535 aa16.98■□□□□ 0.31
SNRPA1-205ENST00000558036 A6NNC1 897 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 P2RX3P56373 397 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 ABCA11PQ4W5N1 156 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 DCAF12L2Q5VW00 463 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 KCTD9Q7L273 389 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 H1FOOQ8IZA3 346 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 MITD1Q8WV92 249 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 SLC2A9Q9NRM0 540 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 ASH1LQ9NR48 2969 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 CCSO14618 274 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 SLC22A5O76082 557 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 GNRHRP30968 328 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 PAX5Q02548 391 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 C11orf88Q6PI97 169 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 LYPD2Q6UXB3 125 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 NLRC3Q7RTR2 1065 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 SPICQ8N5J4 248 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 OR52L2PQ8NGH6 319 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 ARL11Q969Q4 196 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 DNTTIP1Q9H147 329 aa16.97■□□□□ 0.31
SNRPA1-205ENST00000558036 SIGLEC5O15389 551 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 DUS4LO95620 317 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 IL2RGP31785 369 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 CEACAM6P40199 344 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 GNMTQ14749 295 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 LTC4SQ16873 150 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 SLC38A6Q8IZM9 456 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 GALMQ96C23 342 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 PHB2Q99623 299 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 RDH8Q9NYR8 311 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 FBXO9Q9UK97 447 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 OR2W1Q9Y3N9 320 aa16.96■□□□□ 0.31
SNRPA1-205ENST00000558036 TEX13DA0A0J9YY54 714 aaPredicted RBP16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 HSD17B6O14756 317 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 FCN3O75636 299 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 SFT2D2O95562 160 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 SRSF1Q07955 248 aaKnown RBP eCLIP16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 ANKRD55Q3KP44 614 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 ZNF818PQ6ZRF7 136 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 RSRP1Q9BUV0 290 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 SLC5A7Q9GZV3 580 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 CLEC4MQ9H2X3 399 aaPredicted RBP16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 DLL4Q9NR61 685 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 CCL28Q9NRJ3 127 aa16.96■□□□□ 0.3
SNRPA1-205ENST00000558036 IGHV3-43A0A0B4J1X8 118 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 HEXAP06865 529 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 IGHV3-43DP0DP04 118 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 UCP3P55916 312 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 SP6Q3SY56 376 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 C6orf183Q5T699 404 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 OR5D13Q8NGL4 314 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 RTN4IP1Q8WWV3 396 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 RAB1BQ9H0U4 201 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 PIPOXQ9P0Z9 390 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 LRRK2Q5S007 2527 aa16.95■□□□□ 0.3
SNRPA1-205ENST00000558036 CRYM-AS1A6NIL9 109 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 NKX6-3A6NJ46 265 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 NPIPB11E5RHQ5 1161 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 C15orf65H3BRN8 121 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 NDUFB7P17568 137 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 OMGP23515 440 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 CDKN1AP38936 164 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 Q5BKY6 102 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 DTX2Q86UW9 622 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 ZNF565Q8N9K5 539 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 TMEM246Q9BRR3 403 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 TRAF4Q9BUZ4 470 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 ADAM20O43506 726 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 LY6G6FQ5SQ64 297 aa16.94■□□□□ 0.3
SNRPA1-205ENST00000558036 SGPP2Q8IWX5 399 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms