RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TRAPPC6BQ86SZ2 158 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 CLVS1Q8IUQ0 354 aaPredicted RBP13.44□□□□□ -0.26
NEK9-211ENST00000557673 KLHDC1Q8N7A1 406 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 PTX4Q96A99 478 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 NCOR1P1Q9H4R4 102 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 RAB22AQ9UL26 194 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 UBE2J1Q9Y385 318 aaPredicted RBP13.44□□□□□ -0.26
NEK9-211ENST00000557673 MEIKINA0A087WXM9 373 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 SOCS1O15524 211 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 TMEM127O75204 238 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 PAX6P26367 422 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 BLVRBP30043 206 aaPredicted RBP13.43□□□□□ -0.26
NEK9-211ENST00000557673 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
NEK9-211ENST00000557673 LRRC75BQ2VPJ9 315 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 IDNKQ5T6J7 187 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 C6orf201Q7Z4U5 140 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 CROCCP3Q8IVE0 287 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 GAPTQ8N292 157 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 OR56B1Q8NGI3 324 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 OR13A1Q8NGR1 328 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 NDNFQ8TB73 568 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 MRAPQ8TCY5 172 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 CORO2AQ92828 525 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 SLC25A46Q96AG3 418 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 NEDD4LQ96PU5 975 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 SULT4A1Q9BR01 284 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 BARHL1Q9BZE3 327 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 NPFFR1Q9GZQ6 430 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 MEGF9Q9H1U4 602 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 GAL3ST2Q9H3Q3 398 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 ETAA1Q9NY74 926 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 OR6C3Q9NZP0 311 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 SIGLEC9Q9Y336 463 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 ETV7Q9Y603 341 aa13.43□□□□□ -0.26
NEK9-211ENST00000557673 CA11O75493 328 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
NEK9-211ENST00000557673 VEGFCP49767 419 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 LOXL3P58215 753 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 C11orf44Q8N8P7 122 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 RAB2BQ8WUD1 216 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 SLC25A38Q96DW6 304 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 BCL7BQ9BQE9 202 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 DCSTAMPQ9H295 470 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 HEXA-AS1Q9H8Q6 139 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 TAS2R3Q9NYW6 316 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 PLXNB1O43157 2135 aa13.42□□□□□ -0.26
NEK9-211ENST00000557673 hCG_1809904A0A1W2PP81 198 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 A0A1W2PPE2 198 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 A0A1W2PR64 198 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 A0A1W2PRV1 198 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 UBE2QL1A1L167 161 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 ZNF729A6NN14 1252 aaPredicted RBP13.41□□□□□ -0.26
NEK9-211ENST00000557673 IGHV1-8P0DP01 117 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 VSIG10L2P0DP72 767 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 TMBIM6P55061 237 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 LY6EQ16553 131 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 MOGAT2Q3SYC2 334 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 MRGPRDQ8TDS7 321 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 RHBDL2Q9NX52 303 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 CALYQ9NYX4 217 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 HSF4Q9ULV5 492 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 NOTCH3Q9UM47 2321 aa13.41□□□□□ -0.26
NEK9-211ENST00000557673 NBEAL2Q6ZNJ1 2754 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 RAB27BO00194 218 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 CGB3P0DN86 165 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 CGB7P0DN87 165 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 SSTR5P35346 364 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 TMEM50BP56557 158 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 PLAC9Q5JTB6 97 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 PRAMEF5Q5TYX0 476 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 MRPL30Q8TCC3 161 aaKnown RBP13.4□□□□□ -0.26
NEK9-211ENST00000557673 ARHGAP5-AS1Q96IT6 56 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 ABRACLQ9P1F3 81 aa13.4□□□□□ -0.26
NEK9-211ENST00000557673 TRAV39A0A0B4J263 110 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 KBTBD11-OT1A0A1B0GTJ5 212 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 METTL21EPA6NDL7 271 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 MFNGO00587 321 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 NOL3O60936 208 aaKnown RBP13.39□□□□□ -0.27
NEK9-211ENST00000557673 MT-ND4P03905 459 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 HIST1H1DP16402 221 aaKnown RBP13.39□□□□□ -0.27
NEK9-211ENST00000557673 CDK2P24941 298 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 GDNFP39905 211 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 LGALS4P56470 323 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 SPCS2Q15005 226 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 C17orf58Q2M2W7 97 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 HEPN1Q6WQI6 88 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 LHFPL4Q7Z7J7 247 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 OR10R2Q8NGX6 335 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 KCTD12Q96CX2 325 aaKnown RBP13.39□□□□□ -0.27
NEK9-211ENST00000557673 RAB3CQ96E17 227 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 OR4F4Q96R69 305 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 FAAP24Q9BTP7 215 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 PECRQ9BY49 303 aa13.39□□□□□ -0.27
NEK9-211ENST00000557673 RBM38Q9H0Z9 239 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms