RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZNF593O00488 134 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 GLSO94925 669 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 SEMA3DO95025 777 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 TNFP01375 233 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 CTSLP07711 333 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 OMGP23515 440 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 HTR1DP28221 377 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 CRISP3P54108 245 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 OR12D2P58182 307 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 MTPNP58546 118 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 GNB2P62879 340 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 UBA52P62987 128 aaKnown RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 IL5RAQ01344 420 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 ZBTB6Q15916 424 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 BSXQ3C1V8 233 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 CEMP1Q6PRD7 247 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 BHLHA15Q7RTS1 189 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 C6orf120Q7Z4R8 191 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 C11orf42Q8N5U0 333 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 LRRC52Q8N7C0 313 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 LINC01006Q8NI28 216 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 OR5P2Q8WZ92 322 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 TNFRSF14Q92956 283 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 RERGQ96A58 199 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 IMMP1LQ96LU5 166 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 VAT1Q99536 393 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 TEAD3Q99594 435 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 TIPINQ9BVW5 301 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 NANOGQ9H9S0 305 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 RPS10P5Q9NQ39 176 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 VAX2Q9UIW0 290 aa3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 PUS1Q9Y606 427 aaKnown RBP eCLIP3.36□□□□□ -1.87
MTHFD1-216ENST00000557539 A6NDX4 124 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 FABP12A6NFH5 140 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 HAT1O14929 419 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 SS18L1O75177 396 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 CA11O75493 328 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 CGAP01215 116 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 OCMP0CE72 109 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 SSTR5P35346 364 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 UBE2AP49459 152 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ZNF136P52737 540 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 CYP24A1Q07973 514 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 FLOT2Q14254 428 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 TAF9Q16594 264 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 PRSS8Q16651 343 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 Q8N9W7 124 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ZNF738Q8NE65 137 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 OR8G5Q8NG78 346 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ERMNQ8TAM6 284 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ZFAND1Q8TCF1 268 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 PIFOQ8TCI5 191 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 SFXN5Q8TD22 340 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ABHD3Q8WU67 409 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 PATE1Q8WXA2 126 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 FAM19A4Q96LR4 140 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 ZNF488Q96MN9 340 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 NRTNQ99748 197 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 SLC38A1Q9H2H9 487 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 SAV1Q9H4B6 383 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 DDIT4Q9NX09 232 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 PSMD13Q9UNM6 376 aa3.35□□□□□ -1.87
MTHFD1-216ENST00000557539 MYH11P35749 1972 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 INS-IGF2F8WCM5 200 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 CLDN34H7C241 214 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 J3QT63 122 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 ITGB1BP1O14713 200 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 CD8AP01732 235 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 BCHEP06276 602 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 HLA-GP17693 338 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 RPL23P62829 140 aaKnown RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 PRKCDQ05655 676 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 ERCC8Q13216 396 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 EIF4EBP2Q13542 120 aaPredicted RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 TRAM1Q15629 374 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 SNRNP35Q16560 246 aaKnown RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 PLEKHG7Q6ZR37 379 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 Q6ZR54 194 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 RTL4Q6ZR62 310 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 Q6ZT83 130 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 ZBTB8OSQ8IWT0 167 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 ZDHHC22Q8N966 263 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 C19orf18Q8NEA5 215 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 CCL4L1Q8NHW4 92 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 NT5CQ8TCD5 201 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 TM4SF18Q96CE8 201 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 SLC35E1Q96K37 410 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 ZSCAN16Q9H4T2 348 aaPredicted RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 WDR55Q9H6Y2 383 aaPredicted RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 NLE1Q9NVX2 485 aaPredicted RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 RBFOX1Q9NWB1 397 aaKnown RBP3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 NKIRAS1Q9NYS0 192 aa3.34□□□□□ -1.87
MTHFD1-216ENST00000557539 SNX24Q9Y343 169 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms