RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SPIN4Q56A73 249 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SPATA31B1PQ5VZV4 182 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ASCL5Q7RTU5 278 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PDZD9Q8IXQ8 264 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF433Q8N7K0 673 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DOK4Q8TEW6 326 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 S100ZQ8WXG8 99 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CXorf40BQ96DE9 158 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PIK3IP1Q96FE7 263 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GALNT14Q96FL9 552 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 AURKBQ96GD4 344 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HPDLQ96IR7 371 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 BMFQ96LC9 184 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DNAJC30Q96LL9 226 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NAPGQ99747 312 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FAAP24Q9BTP7 215 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PDCD10Q9BUL8 212 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 EBPLQ9BY08 206 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ABCG5Q9H222 651 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ANKHQ9HCJ1 492 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SAR1AQ9NR31 198 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CALML5Q9NZT1 146 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FLVCR2Q9UPI3 526 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SAR1BQ9Y6B6 198 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PTPN23Q9H3S7 1636 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MYOM1P52179 1685 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CLTCQ00610 1675 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 USP54Q70EL1 1684 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 WDR90Q96KV7 1748 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FMN2Q9NZ56 1722 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NWD2Q9ULI1 1742 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RGS12O14924 1447 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1W2PP18 115 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1W2PRD5 423 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 EPOPA6NHQ4 379 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TSTD3H0UI37 97 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DCTN6O00399 190 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 EFNA2O43921 213 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PGLYRP1O75594 196 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RAB36O95755 333 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CD8AP01732 235 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ADRA2AP08913 450 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR4A8P0C604 315 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CELP19835 753 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RPS3P23396 243 aaKnown RBP eCLIP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OMGP23515 440 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 F2RP25116 425 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FGF9P31371 208 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OPRD1P41143 372 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RPL29P47914 159 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 UQCRFS1P47985 274 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 STC1P52823 247 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ACLYP53396 1101 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HMGCS1Q01581 520 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF616Q08AN1 781 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TWF1Q12792 350 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SCGB2B2Q4G0G5 96 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GGTA1PQ4G0N0 100 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CXCL17Q6UXB2 119 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF621Q6ZSS3 439 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NAA40Q86UY6 237 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 P2RY8Q86VZ1 359 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 BLIDQ8IZY5 108 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HIST3H2BBQ8N257 126 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MS4A15Q8N5U1 240 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GATD1Q8NB37 220 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 UBAC2Q8NBM4 344 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR5K2Q8NHB8 316 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TYMSOSQ8TAI1 123 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MRPS31Q92665 395 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RERGQ96A58 199 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SEH1LQ96EE3 360 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CYYR1Q96J86 154 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CAPZA3Q96KX2 299 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NRTNQ99748 197 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GABRG3Q99928 467 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DCUN1D5Q9BTE7 237 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 LINC00470Q9BZP3 86 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DEFB129Q9H1M3 183 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GLIPR2Q9H4G4 154 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IKZF5Q9H5V7 419 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF385DQ9H6B1 395 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 EFCAB1Q9HAE3 211 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TAS2R13Q9NYV9 303 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IDI2-AS1Q9NZ38 188 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CES1P1Q9UKY3 287 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TNFSF18Q9UNG2 199 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ING4Q9UNL4 249 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HSPB11Q9Y547 144 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF646O15015 1829 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ARFGEF1Q9Y6D6 1849 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PXDNLA1KZ92 1463 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TRPM2O94759 1503 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GPATCH8Q9UKJ3 1502 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1W2PRF3 423 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1W2PRM7 423 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM218A2RU14 115 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CLDN24A6NM45 220 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF705EA8MWA4 302 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms