RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 LEAP2Q969E1 77 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 TAF9BQ9HBM6 251 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 F2RL2O00254 374 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 VENTXO95231 258 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 CD3GP09693 182 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 HILS1P60008 231 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 SAMD12Q8N8I0 201 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 OR4P4Q8NGL7 312 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 RBM38Q9H0Z9 239 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 PRDM13Q9H4Q3 707 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 ESM1Q9NQ30 184 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 KCNIP1Q9NZI2 227 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
VIPAS39-210ENST00000557466 DNAJC9-AS1A6NH13 148 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 SPINT2O43291 252 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 MELTFP08582 738 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 FBP1P09467 338 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF182P17025 639 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 PAX6P26367 422 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 GNG10P50151 68 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 LGALS4P56470 323 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 LOXL3P58215 753 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 HLA-DRB3P79483 266 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ARFRP1Q13795 201 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 RBMS3Q6XE24 437 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ZDHHC22Q8N966 263 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 ABCG5Q9H222 651 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 Q9N2K0 584 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 RAB9BQ9NP90 201 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 GFOD1Q9NXC2 390 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 COMMD3Q9UBI1 195 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 FAM96BQ9Y3D0 163 aa12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 TBL2Q9Y4P3 447 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-210ENST00000557466 TRAV18A0A075B6X5 111 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 A0A0A6YYH2 397 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 TMEM235A6NFC5 223 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 A6NJ64 397 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 IGLV1-47P01700 117 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 FCGR3AP08637 254 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 GSTP1P09211 210 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 MRPS15P82914 257 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 BAMBIQ13145 260 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 GNMTQ14749 295 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 ARL6IP1Q15041 203 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 TMEM30BQ3MIR4 351 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 CDNFQ49AH0 187 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 Q6YL49 198 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 LDLRAD3Q86YD5 345 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 DYNAPQ8N1N2 210 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF596Q8TC21 504 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 PSG11Q9UQ72 335 aa12.04□□□□□ -0.48
VIPAS39-210ENST00000557466 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 MXRA5Q9NR99 2828 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 A0A1W2PPE3 182 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 TOR1AO14656 332 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 HACD4Q5VWC8 232 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 DTX3Q8N9I9 347 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 OR52L2PQ8NGH6 319 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 AP3S1Q92572 193 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 DIABLOQ9NR28 239 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 CCDC59Q9P031 241 aaKnown RBP12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
VIPAS39-210ENST00000557466 J3QR06 171 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 SSX5O60225 188 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 HPGDSO60760 199 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 IGHV4-59P01825 116 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms