RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PMP2P02689 132 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MT-ND4P03905 459 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 TK1P04183 234 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MELTFP08582 738 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A13PP0C7W8 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A24PP0C7X0 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 GSTT2P0CG29 244 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 IL7P13232 177 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 RPS2P15880 293 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MUC1P15941 1255 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 NDUFB7P17568 137 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 RCC1P18754 421 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 HLA-DMAP28067 261 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 PRSS3P35030 304 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MDH2P40926 338 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 NR4A2P43354 598 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 PPP5CP53041 499 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 DLX1P56177 255 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MRPS11P82912 194 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF45Q02386 682 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF273Q14593 569 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MICBQ29980 383 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 KRBOX4Q5JUW0 171 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ATPAF1Q5TC12 328 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 HACD4Q5VWC8 232 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FIP1L1Q6UN15 594 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 BAIAP2L2Q6UXY1 529 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 DNM1P46Q6ZS02 220 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 TCF23Q7RTU1 214 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 LINC00596Q86U02 117 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 LYSMD2Q8IV50 215 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 C1orf87Q8N0U7 546 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 Q8N402 240 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 OR13A1Q8NGR1 328 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 CLDND2Q8NHS1 167 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MRGPRDQ8TDS7 321 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 C10orf105Q8TEF2 133 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 S100ZQ8WXG8 99 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 RAB1CQ92928 201 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 SNAPC3Q92966 411 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 TRIM63Q969Q1 353 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 CREB3L1Q96BA8 519 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 SNX22Q96L94 193 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 NUDT16L1Q9BRJ7 211 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ST6GALNAC5Q9BVH7 336 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 C19orf24Q9BVV8 132 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 BEX2Q9BXY8 128 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 WDR12Q9GZL7 423 aaKnown RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 RHOFQ9HBH0 211 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 CHMP1AQ9HD42 196 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 C19orf12Q9NSK7 152 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 KIF25Q9UIL4 384 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FBXO9Q9UK97 447 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ROS1P08922 2347 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 MEIKINA0A087WXM9 373 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 A0A0A6YYH2 397 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV3-43A0A0B4J1X8 118 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 IGKV1-6A0A0C4DH72 117 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 FAM172BPA6NC97 362 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 A6NJ64 397 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 F5H0A9 414 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GABARAPH6UMI1 98 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 IFNL4K9M1U5 179 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 M0QYG6 137 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 SDCBPO00560 298 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 CTDSPLO15194 276 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PLA2G10O15496 165 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 NDUFB3O43676 98 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GSTZ1O43708 216 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 MMP23AO75900 390 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 NAPSAO96009 420 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 CSN2P05814 226 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 FCGR3AP08637 254 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 WNT2P09544 360 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 SCTP09683 121 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV3-43DP0DP04 118 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 SPNP16150 400 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 CCL3L1P16619 93 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 ZFP36P26651 326 aaKnown RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GIFP27352 417 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 EDDM3BP56851 147 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM33P57088 247 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 LMO4P61968 165 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PITPNAQ00169 270 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 KLF9Q13886 244 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 LTC4SQ16873 150 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PNLIPRP3Q17RR3 467 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM155Q4W5P6 130 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TRIQKQ629K1 86 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF57Q68EA5 555 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF497Q6ZNH5 498 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 LINC00299Q6ZSB3 139 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PEG10Q86TG7 708 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms