RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 Q6ZS46 218 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 GAPTQ8N292 157 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 SVOPQ8N4V2 548 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 KLHDC1Q8N7A1 406 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 C11orf44Q8N8P7 122 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 OR10V1Q8NGI7 309 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 MRPL30Q8TCC3 161 aaKnown RBP8.32□□□□□ -1.08
SNX6-208ENST00000556712 RPEQ96AT9 228 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 RANBP3Q9H6Z4 567 aaPredicted RBP8.32□□□□□ -1.08
SNX6-208ENST00000556712 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FBLN5Q9UBX5 448 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 PITPNC1Q9UKF7 332 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 AMMECR1Q9Y4X0 333 aaPredicted RBP8.32□□□□□ -1.08
SNX6-208ENST00000556712 TET2Q6N021 2002 aaPredicted RBP8.31□□□□□ -1.08
SNX6-208ENST00000556712 SMIM30A4D0T7 59 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
SNX6-208ENST00000556712 SOCS1O15524 211 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 ORC5O43913 435 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 HBZP02008 142 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 VSIG10L2P0DP72 767 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 CD37P11049 281 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 CEACAM3P40198 252 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 REG1BP48304 166 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 LOXL3P58215 753 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 GNMTQ14749 295 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 C22orf42Q6IC83 251 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 Q6ZPA2 131 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 OR10A7Q8NGE5 316 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 OR51D1Q8NGF3 324 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 OR10X1Q8NGY0 326 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 OR56B4Q8NH76 319 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 OR2T6Q8NHC8 308 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 KCNG3Q8TAE7 436 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 RBMXL1Q96E39 390 aaKnown RBP8.31□□□□□ -1.08
SNX6-208ENST00000556712 NEDD4LQ96PU5 975 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 HDHD3Q9BSH5 251 aaPredicted RBP8.31□□□□□ -1.08
SNX6-208ENST00000556712 SLC25A33Q9BSK2 321 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 FAAP24Q9BTP7 215 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 TM2D1Q9BX74 207 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 LPAR5Q9H1C0 372 aa8.31□□□□□ -1.08
SNX6-208ENST00000556712 A0A0B4J203 849 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 TRDV1A0A1B0GX56 115 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 CCRL2O00421 344 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 HSD17B6O14756 317 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 TIMM23O14925 209 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 MRPS14O60783 128 aaKnown RBP8.3□□□□□ -1.08
SNX6-208ENST00000556712 SNRNP70P08621 437 aaKnown RBP8.3□□□□□ -1.08
SNX6-208ENST00000556712 ARSBP15848 533 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 GZMHP20718 246 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 BLVRBP30043 206 aaPredicted RBP8.3□□□□□ -1.08
SNX6-208ENST00000556712 BRS3P32247 399 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 KIR2DS4P43632 304 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 BLCAPP62952 87 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 MADCAM1Q13477 382 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 NEDD8Q15843 81 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
SNX6-208ENST00000556712 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 C6orf183Q5T699 404 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 ZNF773Q6PK81 442 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 CD200R1LQ6Q8B3 271 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 OR2W3Q7Z3T1 314 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 DRAM1Q8N682 238 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 CAPSLQ8WWF8 208 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 CFHR4Q92496 578 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 CREB3L1Q96BA8 519 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 ZNF696Q9H7X3 374 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 TAF9BQ9HBM6 251 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 SERTAD4Q9NUC0 356 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
SNX6-208ENST00000556712 GNG12Q9UBI6 72 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 V9GY05 133 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
SNX6-208ENST00000556712 IGHV3-72A0A0B4J1Y9 119 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 TMEM272A0A1B0GTI8 110 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 FOXI3A8MTJ6 420 aaPredicted RBP8.29□□□□□ -1.08
SNX6-208ENST00000556712 SPINT2O43291 252 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 TSPAN15O95858 294 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 GLAP06280 429 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 MYL9P24844 172 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 PPP1CCP36873 323 aaKnown RBP8.29□□□□□ -1.08
SNX6-208ENST00000556712 MNDAP41218 407 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 ARHGDIBP52566 201 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 NR2C2APQ86WQ0 139 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 Q8N2B8 174 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 SETD6Q8TBK2 473 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 FCGR1BQ92637 280 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 FAM3DQ96BQ1 224 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 YTHDF1Q9BYJ9 559 aaKnown RBP8.29□□□□□ -1.08
SNX6-208ENST00000556712 CHMP1AQ9HD42 196 aaPredicted RBP8.29□□□□□ -1.08
SNX6-208ENST00000556712 TXNL4BQ9NX01 149 aaKnown RBP8.29□□□□□ -1.08
SNX6-208ENST00000556712 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 AK3Q9UIJ7 227 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 LRRC42Q9Y546 428 aa8.29□□□□□ -1.08
SNX6-208ENST00000556712 IGHV1-3A0A0C4DH29 117 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 OOSP1A8MZH6 123 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms