RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 IGSF23A1L1A6 192 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 FAM24AA6NFZ4 105 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 NPIPB11E5RHQ5 1161 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 TAAR5O14804 337 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 EPHA1P21709 976 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 GNMTQ14749 295 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF718Q3SXZ3 478 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 SHEQ5VZ18 495 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 MBNL2Q5VZF2 373 aaKnown RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 MOB1BQ7L9L4 216 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 TPRX1Q8N7U7 411 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 OR5D13Q8NGL4 314 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 COQ2Q96H96 371 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 NARS2Q96I59 477 aaKnown RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 BCL2L14Q9BZR8 327 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 TLNRD1Q9H1K6 362 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 PIGMQ9H3S5 423 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 TREM2Q9NZC2 230 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 KCNS2Q9ULS6 477 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 WIPI2Q9Y4P8 454 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 RFNGQ9Y644 331 aa8.52□□□□□ -1.05
TMEM260-211ENST00000556648 CHD3Q12873 2000 aaKnown RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 C1QTNF9BB2RNN3 333 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ABCD4O14678 606 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 MED6O75586 246 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM50AO95807 157 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 IGKV1-39P01597 117 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 APOC3P02656 99 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 GAPDHP04406 335 aaKnown RBP8.51□□□□□ -1.05
TMEM260-211ENST00000556648 IGKV1D-39P04432 117 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 F2RP25116 425 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 GCH1P30793 250 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 OR3A1P47881 315 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 P2RY1P47900 373 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 EWSR1Q01844 656 aaKnown RBP eCLIP8.51□□□□□ -1.05
TMEM260-211ENST00000556648 AESQ08117 197 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 BTN1A1Q13410 526 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 PXDC1Q5TGL8 231 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 VHLLQ6RSH7 139 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 C22orf34Q6ZV56 151 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ODF3L1Q8IXM7 274 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 CMTM1Q8IZ96 169 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 OR2Z1Q8NG97 314 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 C5orf30Q96GV9 206 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 HRH4Q9H3N8 390 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM30CPA0ZSE6 113 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 HSPA12AO43301 675 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 OR8U9P0C7N5 309 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
TMEM260-211ENST00000556648 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
TMEM260-211ENST00000556648 COL10A1Q03692 680 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 FOXC1Q12948 553 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 CD177Q8N6Q3 437 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 OR52L2PQ8NGH6 319 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 OR8U1Q8NH10 309 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 LRRC29Q8WV35 223 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ARL11Q969Q4 196 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 DCTN5Q9BTE1 182 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 ARV1Q9H2C2 271 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 TP53TG5Q9Y2B4 290 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 FAM96BQ9Y3D0 163 aa8.51□□□□□ -1.05
TMEM260-211ENST00000556648 DSPP15924 2871 aaKnown RBP8.5□□□□□ -1.05
TMEM260-211ENST00000556648 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 MED19A0JLT2 244 aaPredicted RBP8.5□□□□□ -1.05
TMEM260-211ENST00000556648 C12orf77C9JDV5 145 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 JTBO76095 146 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 ACAA1P09110 424 aaPredicted RBP8.5□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
TMEM260-211ENST00000556648 CEACAM6P40199 344 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 SULT1A2P50226 295 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 FAM57AQ8TBR7 257 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 MRGPRDQ8TDS7 321 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 MMP26Q9NRE1 261 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 DUSP13Q9UII6 198 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 RNF150Q9ULK6 438 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 MUC6Q6W4X9 2439 aa8.5□□□□□ -1.05
TMEM260-211ENST00000556648 IGHV3OR15-7A0A075B7D8 119 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 A0A1B0GWJ7 208 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 RAB19A4D1S5 217 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CLEC18AA5D8T8 446 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 ATP6V1G2-DDX39BF2Z307 99 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 AGPAT2O15120 278 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 NUPL2O15504 423 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 C1QL1O75973 258 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 IGKV1-5P01602 117 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CRYABP02511 175 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 HEXAP06865 529 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 VDAC1P21796 283 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 OMGP23515 440 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 LMO1P25800 156 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 SSTR5P35346 364 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 GLIPR1P48060 266 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CAV2P51636 162 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms