RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LAMA3Q16787 3333 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 AHCTF1Q8WYP5 2266 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 IGKV1D-43A0A0B4J1Z2 117 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 TRAV17A0A0B4J275 112 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 OR6C6A6NF89 314 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZNF724A8MTY0 619 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 RPL36A-HNRNPH2H7BZ11 118 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 CCSO14618 274 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 PLA2G10O15496 165 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SGCEO43556 437 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SNAI2O43623 268 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 RAMP1O60894 148 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 MRPL33O75394 65 aaKnown RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 MPZL1O95297 269 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 IGHG3P01860 377 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 TTRP02766 147 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ALDOBP05062 364 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ACSM4P0C7M7 580 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 UBBP0CG47 229 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 PSKH1P11801 424 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 GABRA1P14867 456 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZNF708P17019 499 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 CCL1P22362 96 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 HLA-DMAP28067 261 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SLC6A1P30531 599 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ID1P41134 155 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 CX3CR1P49238 355 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 LHX2P50458 406 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 CLDN6P56747 220 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ACTBP60709 375 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZP1P60852 638 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ACTG1P63261 375 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ARG2P78540 354 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ARL6IP1Q15041 203 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 RAB35Q15286 201 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SF3B4Q15427 424 aaKnown RBP eCLIP4.27□□□□□ -1.736e-8■■■■□ 19.5
SRP54-211ENST00000556445 TMEM69Q5SWH9 247 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 DRAM2Q6UX65 266 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 Q6ZSV7 163 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 OR2W3Q7Z3T1 314 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 TMEM251Q8N6I4 163 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZIC4Q8N9L1 334 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZFP62Q8NB50 900 aaPredicted RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 DMBX1Q8NFW5 382 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 OR5H6Q8NGV6 325 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 PP6455Q8WZ26 134 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 FAM3DQ96BQ1 224 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 TIMD4Q96H15 378 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZNF385AQ96PM9 386 aaKnown RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 SIGLEC12Q96PQ1 595 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 MARVELD1Q9BSK0 173 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 SRXN1Q9BYN0 137 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 TTTY12Q9BZ98 90 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 METTL17Q9H7H0 456 aaPredicted RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 ASCL3Q9NQ33 180 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 OR5V1Q9UGF6 321 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 ZNF107Q9UII5 783 aaPredicted RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 FBXL3Q9UKT7 428 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 RAB22AQ9UL26 194 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 MRPS18BQ9Y676 258 aaKnown RBP4.27□□□□□ -1.73
SRP54-211ENST00000556445 CACNG2Q9Y698 323 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
SRP54-211ENST00000556445 GPR179Q6PRD1 2367 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 TRGV5A0A0B4J1U4 118 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 IGHV3-15A0A0B4J1V0 119 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 A0A0G2JMM0 328 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 A0A1B0GTH9 108 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 A0A1B0GUS0 222 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 SPAARA0A1B0GVQ0 90 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 A0A1W2PPB8 328 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 A0A1W2PRS3 328 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 TMEM213A2RRL7 107 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 GGT3PA6NGU5 568 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ARGFXA6NJG6 315 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 FAM74A7A6NL05 159 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 KIR3DP1A8MWS1 328 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ZNF587BE7ETH6 402 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 INMT-MINDY4F8WBC2 141 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 SMLR1H3BR10 107 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 M0R135 149 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 RER1O15258 196 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 EEF1E1O43324 174 aaKnown RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 XRCC2O43543 280 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 FCN3O75636 299 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 CCNKO75909 580 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 DHRS3O75911 302 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 SNAPC5O75971 98 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 GLSO94925 669 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 COX5BP10606 129 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 PMCHP20382 165 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 GIFP27352 417 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 PRSS3P35030 304 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 PRKXP51817 358 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms