RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GNG12Q9UBI6 72 aa10.7□□□□□ -0.7
ACTN1-219ENST00000556432 WARS2Q9UGM6 360 aaKnown RBP10.7□□□□□ -0.7
ACTN1-219ENST00000556432 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-219ENST00000556432 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 SLC31A2O15432 143 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 IGLV1-51P01701 117 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 HLA-DRB1P01911 266 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
ACTN1-219ENST00000556432 IL13RA2Q14627 380 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 FAHD1Q6P587 224 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 SLC25A48Q6ZT89 311 aaKnown RBP10.69□□□□□ -0.7
ACTN1-219ENST00000556432 C8orf31Q8N9H6 132 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 SUMF2Q8NBJ7 301 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 OR10V1Q8NGI7 309 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 OR51A4Q8NGJ6 313 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 OR10K1Q8NGX5 313 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 NEK7Q8TDX7 302 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 GPER1Q99527 375 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 ANKRD60Q9BZ19 345 aa10.69□□□□□ -0.7
ACTN1-219ENST00000556432 PLECQ15149 4684 aaKnown RBP10.69□□□□□ -0.7
ACTN1-219ENST00000556432 B2RBV5 119 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 C15orf65H3BRN8 121 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 CNTFRP26992 372 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 ACTBP60709 375 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 PAX5Q02548 391 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 LSAMPQ13449 338 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 RSU1Q15404 277 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 ELP2Q6IA86 826 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 SATL1Q86VE3 508 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 TNFAIP8L1Q8WVP5 186 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 ASB9Q96DX5 294 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 CST11Q9H112 138 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 TPSG1Q9NRR2 321 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 FRRS1LQ9P0K9 344 aa10.68□□□□□ -0.7
ACTN1-219ENST00000556432 HERC2O95714 4834 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 H0Y980 276 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 NBR2O15453 112 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 SULT1B1O43704 296 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-219ENST00000556432 HTR3BO95264 441 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 ISG15P05161 165 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 HTR1AP08908 422 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 TPPP2P59282 170 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 LIN54Q6MZP7 749 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 PRR18Q8N4B5 295 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 CPNE2Q96FN4 548 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-219ENST00000556432 MS4A10Q96PG2 267 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 ZNF581Q9P0T4 197 aa10.67□□□□□ -0.7
ACTN1-219ENST00000556432 SOX15O60248 233 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 MITFO75030 526 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-219ENST00000556432 T-ENOLP0DO92 83 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 EPHA2P29317 976 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 DAPP51397 102 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 ZNF137PP52743 207 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 NANOS3P60323 173 aaKnown RBP10.66□□□□□ -0.7
ACTN1-219ENST00000556432 PLGLAQ15195 96 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 LRRC36Q1X8D7 754 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 RNLSQ5VYX0 342 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 C12orf73Q69YU5 71 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 HIPK2Q9H2X6 1198 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 CEPT1Q9Y6K0 416 aa10.66□□□□□ -0.7
ACTN1-219ENST00000556432 ZAR1LA6NP61 321 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 AIPO00170 330 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 ARPC1BO15143 372 aaKnown RBP10.65□□□□□ -0.7
ACTN1-219ENST00000556432 MAGEB3O15480 346 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 SPINT2O43291 252 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 LANCL1O43813 399 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 ORC5O43913 435 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 HOXB6P17509 224 aaKnown RBP10.65□□□□□ -0.7
ACTN1-219ENST00000556432 CD40LGP29965 261 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 VHLP40337 213 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 EFNB1P98172 346 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 NDPQ00604 133 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 ZNF85Q03923 595 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 Q3ZCU0 254 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 ATAD3CQ5T2N8 411 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 STX19Q8N4C7 294 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 PXT1Q8NFP0 134 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 RITA1Q96K30 269 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 RAB9BQ9NP90 201 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 DHDHQ9UQ10 334 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 ST3GAL6Q9Y274 331 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 FBXO7Q9Y3I1 522 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 PCLOQ9Y6V0 5065 aa10.65□□□□□ -0.7
ACTN1-219ENST00000556432 AQP12BA6NM10 295 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 GABRPO00591 440 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 RGS11O94810 467 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 ZP3P21754 424 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF134P52741 427 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 TMEM267Q0VDI3 215 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-219ENST00000556432 RAB40BQ12829 278 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 ACTBL2Q562R1 376 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms