RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM74A3Q4VXF1 159 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 OR2B11Q5JQS5 317 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 C9orf129Q5T035 196 aaKnown RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 SYT6Q5T7P8 510 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 FAM71E1Q6IPT2 247 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 ENPP6Q6UWR7 440 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 OLIG3Q7RTU3 272 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 MRPL52Q86TS9 123 aaKnown RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 NIT1Q86X76 327 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 C10orf107Q8IVU9 208 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 SVOPLQ8N434 492 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 EIF4E3Q8N5X7 224 aaKnown RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 METTL13Q8N6R0 699 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 ZNF283Q8N7M2 679 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 C15orf54Q8N8G6 183 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 OR5L2Q8NGL0 311 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 OR9Q1Q8NGQ5 310 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 OR6K6Q8NGW6 343 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 LYPD6BQ8NI32 183 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 SFXN5Q8TD22 340 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 ASB17Q8WXJ9 295 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 RAB8BQ92930 207 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 CCDC126Q96EE4 140 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 CPNE2Q96FN4 548 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 C14orf144Q96I85 54 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 KCTD7Q96MP8 289 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 FOPNLQ96NB1 174 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 CNN2Q99439 309 aaKnown RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 PDCD10Q9BUL8 212 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 ACTR3CQ9C0K3 210 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 MIXL1Q9H2W2 232 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 TXNIPQ9H3M7 391 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 PPDPFQ9H3Y8 114 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 DSN1Q9H410 356 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 FAM96AQ9H5X1 160 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 RDH14Q9HBH5 336 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 ISYNA1Q9NPH2 558 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 SLC17A5Q9NRA2 495 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 FBXO6Q9NRD1 293 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 AGPAT4Q9NRZ5 378 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 BFARQ9NZS9 450 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 WRAP73Q9P2S5 460 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 ZNF223Q9UK11 482 aaPredicted RBP2.4□□□□□ -2.03
SRP54-209ENST00000555746 MMP17Q9ULZ9 603 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 MYOFQ9NZM1 2061 aa2.4□□□□□ -2.03
SRP54-209ENST00000555746 COL27A1Q8IZC6 1860 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 ARID1AO14497 2285 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 BAZ2AQ9UIF9 1905 aaKnown RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 IGHV1OR15-9A0A0B4J2B8 117 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 A0A0G2JMP0 313 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 GLYATL1P3A0A0U1RQE8 302 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 KIR2DS1A0A191URI9 304 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 A0A1W2PNU3 283 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 TVP23AA6NH52 213 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 A8MU10 97 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 B4DXG7 233 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TMX2-CTNND1H3BSU7 103 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 J3QLI3 93 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SLC17A3O00476 420 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 FGF16O43320 207 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ENSAO43768 121 aaKnown RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 PDE6DO43924 150 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TRAPPC6AO75865 159 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LY6G6DO95868 133 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 CD160O95971 181 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 IFNA1P01562 189 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 RLN2P04090 185 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TYMSP04818 313 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 BPGMP07738 259 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 GIPP09681 153 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 TSPAN19P0C672 248 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 METTL15P1P0C7V9 234 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ZNF25P17030 456 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 SPI1P17947 270 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 PGCP20142 388 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 GZMHP20718 246 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 RFC3P40938 356 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 QARSP47897 775 aaKnown RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 SULT1A1P50225 295 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SULT1A2P50226 295 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 EFNA3P52797 238 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LIM2P55344 173 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 CLDN12P56749 244 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TCTAP57738 103 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 DNAJB13P59910 316 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SLC35B1P78383 322 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SLC7A9P82251 487 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 GTF2BQ00403 316 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 PRKCDQ05655 676 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 RGS1Q08116 209 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 KIR2DS1Q14954 304 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ZNF77Q15935 545 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TAL2Q16559 108 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 CEACAM21Q3KPI0 293 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LIN52Q52LA3 116 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms