RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 ASB13Q8WXK3 278 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ADIPOR1Q96A54 375 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 NOL4LQ96MY1 436 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF586Q9NXT0 402 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 KLHDC2Q9Y2U9 406 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 SYNGR3O43761 229 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 TTRP02766 147 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 CELA3AP09093 270 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ERGP11308 486 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 CD40P25942 277 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 FAM78BQ5VT40 261 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 CENPVQ7Z7K6 275 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 NFAM1Q8NET5 270 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 OR8G5Q8NG78 346 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 OR4P4Q8NGL7 312 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RHOFQ9HBH0 211 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 PITPNC1Q9UKF7 332 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 TRAV8-7A0A075B6U6 113 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 NEURL1O76050 574 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ASAH2BP0C7U1 165 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 PSG2P11465 335 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 CSRP1P21291 193 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 HTR1DP28221 377 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 MMP16P51512 607 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 DYNLT3P51808 116 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ROM1Q03395 351 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 IL13RA2Q14627 380 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 PSG5Q15238 335 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF638Q14966 1978 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 C4orf51C9J302 202 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF737O75373 536 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RPS4Y1P22090 263 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 MPV17P39210 176 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RPL27AP46776 148 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ACSF3Q4G176 576 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF429Q86V71 674 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 C2CD4CQ8TF44 421 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 OR4C12Q96R67 309 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 KCNK17Q96T54 332 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ANKRD31Q8N7Z5 1873 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 LEUTXA8MZ59 168 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 IFNL4K9M1U5 179 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RNF224P0DH78 156 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 SPNP16150 400 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 KLF14Q8TD94 323 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 MARS2Q96GW9 593 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 MS4A10Q96PG2 267 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 B9A039 149 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RNASEK-C17orf49H0YIS7 233 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 HSBP1O75506 76 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 OR2H2O95918 312 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 HBZP02008 142 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RAG2P55895 527 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF154Q13106 437 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 SLC25A53Q5H9E4 307 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 EBLN2Q6P2I7 272 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 RNASEKQ6P5S7 137 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ABHD14BQ96IU4 210 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 PGLYRP3Q96LB9 341 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 AKIRIN1Q9H9L7 192 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 YTHDF2Q9Y5A9 579 aaKnown RBP7.12□□□□□ -1.27
SYNE2-220ENST00000555612 TRIM77I1YAP6 450 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 NDUFA2O43678 99 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 PMCHP20382 165 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 VWA1Q6PCB0 445 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 C16orf82Q7Z2V1 217 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 CHAC2Q8WUX2 184 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 SCN3AQ9NY46 2000 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 RFPL3SP0C7P2 107 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 GALR1P47211 349 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 GCSAMQ8N6F7 178 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 NXF2Q9GZY0 626 aaKnown RBP7.11□□□□□ -1.27
SYNE2-220ENST00000555612 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-220ENST00000555612 FOXH1O75593 365 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 NPY1RP25929 384 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 CAMPP49913 170 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 KRTDAPP60985 99 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 IRF3Q14653 427 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 RRN3P1Q2M238 152 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 CLEC18BQ6UXF7 455 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 GPA33Q99795 319 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 TLNRD1Q9H1K6 362 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 GHITMQ9H3K2 345 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 HIST1H1EP10412 219 aaKnown RBP7.11□□□□□ -1.27
SYNE2-220ENST00000555612 WNT5AP41221 380 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 Q9N2K0 584 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 SLC2A9Q9NRM0 540 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 NAT8BQ9UHF3 227 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 MMP24Q9Y5R2 645 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 PTP4A3O75365 173 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 C1QCP02747 245 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 HOXB1P14653 301 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-220ENST00000555612 FABP4P15090 132 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 ST3GAL2Q16842 350 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 HCP5Q6MZN7 132 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 RPS4Y2Q8TD47 263 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms